C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000305_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000146955-ENSG00000133606 CGP 9606 7:140404043-140479569
GeneTranscriptPositionBiotype
ENSG00000103200 (RP11-723C11.2)
 ENST00000489972 (RP11-723C11.2-001) 140435316-140435787 processed_pseudogene
ENSG00000133606 (MKRN1)
makorin ring finger protein 1 		ENST00000255977 (MKRN1-001) 140453040-140479569 protein_coding
ENST00000443720 (MKRN1-002) 140456192-140479499 protein_coding
ENST00000463142 (MKRN1-018) 140454464-140455911 protein_coding
ENST00000467513 (MKRN1-013) 140459091-140478656 protein_coding
ENST00000468447 (MKRN1-017) 140454665-140456919 retained_intron
ENST00000471104 (MKRN1-011) 140459007-140479066 protein_coding
ENST00000473444 (MKRN1-012) 140459798-140479037 protein_coding
ENST00000474576 (MKRN1-007) 140454268-140478984 protein_coding
ENST00000475010 (MKRN1-006) 140453047-140479336 retained_intron
ENST00000475180 (MKRN1-016) 140459841-140479182 nonsense_mediated_decay
ENST00000480552 (MKRN1-015) 140456180-140478926 protein_coding
ENST00000481705 (MKRN1-009) 140459929-140479536 processed_transcript
ENST00000494939 (MKRN1-014) 140459178-140478503 protein_coding
ENST00000495305 (MKRN1-003) 140454143-140479368 nonsense_mediated_decay
ENST00000496169 (MKRN1-005) 140456186-140479355 nonsense_mediated_decay
ENST00000498535 (MKRN1-010) 140459772-140479354 nonsense_mediated_decay
ENSG00000157800 (SLC37A3)
solute carrier family 37, member 3 		ENST00000326232 (SLC37A3-001) 140333752-140398549 protein_coding
ENST00000340308 (SLC37A3-007) 140333752-140398457 protein_coding
ENST00000447932 (SLC37A3-004) 140333752-140398502 protein_coding
ENST00000460560 (SLC37A3-002) 140335321-140398508 retained_intron
ENST00000461089 (SLC37A3-011) 140358640-140398550 processed_transcript
ENST00000462881 (SLC37A3-015) 140364459-140398478 nonsense_mediated_decay
ENST00000464834 (SLC37A3-018) 140351889-140369662 nonsense_mediated_decay
ENST00000464865 (SLC37A3-003) 140351520-140398504 retained_intron
ENST00000467233 (SLC37A3-016) 140379878-140382474 retained_intron
ENST00000469193 (SLC37A3-012) 140352062-140398532 protein_coding
ENST00000469636 (SLC37A3-009) 140333791-140343489 protein_coding
ENST00000473060 (SLC37A3-008) 140333754-140344086 retained_intron
ENST00000473707 (SLC37A3-017) 140351876-140369682 processed_transcript
ENST00000477006 (SLC37A3-024) 140335290-140345907 protein_coding
ENST00000477571 (SLC37A3-006) 140293693-140398489 nonsense_mediated_decay
ENST00000484416 (SLC37A3-020) 140351361-140364491 nonsense_mediated_decay
ENST00000485139 (SLC37A3-027) 140335472-140337825 retained_intron
ENST00000485538 (SLC37A3-026) 140334989-140343530 protein_coding
ENST00000485734 (SLC37A3-021) 140335455-140352100 protein_coding
ENST00000485861 (SLC37A3-019) 140348626-140369654 protein_coding
ENST00000487319 (SLC37A3-028) 140348458-140351405 retained_intron
ENST00000490760 (SLC37A3-014) 140351431-140398481 nonsense_mediated_decay
ENST00000491357 (SLC37A3-022) 140334891-140348686 protein_coding
ENST00000491505 (SLC37A3-010) 140382483-140404310 protein_coding
ENST00000492027 (SLC37A3-023) 140335105-140351357 protein_coding
ENST00000493423 (SLC37A3-029) 140400336-140404433 retained_intron
ENST00000495257 (SLC37A3-013) 140379259-140398507 processed_transcript
ENST00000498469 (SLC37A3-025) 140334870-140345911 protein_coding

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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CIL_000305_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029923-ENSMUSG00000029922 CGP 10090 6:39381175-39420462
GeneTranscriptPositionBiotype
ENSMUSG00000029922 (Mkrn1)
makorin, ring finger protein, 1 		ENSMUST00000031985 (Mkrn1-001) 39397804-39420462 protein_coding
ENSMUST00000051671 (Mkrn1-005) 39400760-39420358 protein_coding
ENSMUST00000114822 (Mkrn1-002) 39405539-39420298 protein_coding
ENSMUST00000114823 (Mkrn1-004) 39397804-39419776 protein_coding
ENSMUST00000122874 (Mkrn1-008) 39401275-39405081 processed_transcript
ENSMUST00000122996 (Mkrn1-003) 39400754-39420067 protein_coding
ENSMUST00000146785 (Mkrn1-006) 39404811-39419757 protein_coding
ENSMUST00000150575 (Mkrn1-007) 39399143-39404730 protein_coding
ENSMUSG00000029923 (Rab19)
RAB19, member RAS oncogene family 		ENSMUST00000031986 (Rab19-001) 39381175-39390380 protein_coding

Mus musculus Ensembl (GRCm38)

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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000305_0001ENSG00000103200ENST00000489972ENSG00000133606ENST00000255977ENST00000443720ENST00000463142ENST00000468447ENST00000471104ENST00000474576ENST00000475010ENSG00000157800ENST00000326232ENST00000340308ENST00000447932ENST00000460560ENST00000467233ENST00000469636ENST00000473060ENST00000473707ENST00000484416ENST00000485538ENST00000487319ENST00000491357ENST00000498469CIL_000305_0002ENSMUSG00000029922ENSMUST00000031985ENSMUST00000051671ENSMUST00000114822ENSMUST00000114823ENSMUST00000122996ENSMUST00000150575ENSMUSG00000029923ENSMUST00000031986
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103200 ENST00000489972 N/A N/A N/A N/A N/A N/A N/A 0.233±0.00 N/A N/A N/A N/A N/A 0.192±0.00
ENSG00000133606 ENST00000255977 18.798±0.00 9.006±0.00 N/A 7.382±6.16 8.221±3.12 10.172±5.29 6.664±4.24 9.179±5.27 3.441±1.45 N/A 7.763±6.43 12.540±7.50 9.866±6.13 38.935±14.24
ENST00000443720 N/A N/A N/A 15.164±6.06 N/A N/A 2.871±0.00 N/A 3.871±0.00 12.005±5.97 13.087±0.00 N/A 6.818±1.19 N/A
ENST00000463142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 48.235±0.00 23.902±0.00 107.662±0.00
ENST00000467513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468447 N/A N/A N/A N/A N/A N/A N/A N/A 9.418±0.00 N/A N/A N/A N/A N/A
ENST00000471104 N/A N/A N/A N/A N/A N/A N/A 3.943±0.00 N/A N/A 2.234±0.00 N/A N/A N/A
ENST00000473444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474576 N/A N/A N/A N/A N/A N/A 8.256±0.00 N/A N/A N/A 0.664±0.00 N/A N/A N/A
ENST00000475010 N/A 4.336±0.00 N/A N/A N/A N/A N/A 1.183±0.00 N/A 1.860±0.00 N/A 2.362±0.00 N/A N/A
ENST00000475180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000157800 ENST00000326232 4.059±0.00 3.765±0.00 N/A N/A 2.908±0.93 1.666±0.92 1.189±0.00 4.498±0.00 1.501±0.94 1.826±0.72 N/A 5.986±2.20 7.636±0.08 1.299±0.55
ENST00000340308 N/A N/A 1.936±0.00 N/A N/A 1.385±0.00 N/A N/A N/A N/A N/A N/A 1.514±0.01 1.333±0.54
ENST00000447932 N/A N/A N/A 3.086±0.00 3.939±0.00 N/A N/A 1.361±0.00 N/A N/A N/A 3.662±0.00 N/A N/A
ENST00000460560 N/A N/A 1.201±0.00 N/A N/A N/A N/A N/A 1.415±0.00 N/A N/A N/A N/A N/A
ENST00000461089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.786±0.00 N/A N/A N/A
ENST00000469193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469636 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.389±0.00 0.569±0.00 7.017±2.22 N/A 1.086±0.00
ENST00000473060 N/A N/A N/A N/A 3.010±0.00 N/A N/A N/A N/A N/A 0.754±0.00 2.459±0.00 N/A N/A
ENST00000473707 N/A N/A N/A N/A 18.666±0.00 N/A N/A N/A 9.312±0.00 N/A N/A 20.326±0.00 N/A N/A
ENST00000477006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.773±0.00 48.211±0.00 7.181±0.00
ENST00000485139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485538 N/A N/A N/A N/A N/A N/A N/A 2.845±0.00 N/A N/A N/A N/A N/A N/A
ENST00000485734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.766±0.00 N/A N/A N/A
ENST00000490760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491357 N/A N/A N/A 6.899±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498469 N/A N/A N/A N/A N/A 6.857±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029922 ENSMUST00000031985 9.092±2.17 11.326±2.25 15.053±0.24 30.691±16.73 10.567±1.31 60.730±6.34 11.009±6.13 11.843±0.26 23.564±20.29 18.022±1.80 2.101±0.70 16.240±4.06 11.833±3.69 58.812±12.79
ENSMUST00000051671 3.571±0.00 N/A N/A N/A 4.951±0.00 N/A 2.420±0.11 N/A 20.030±1.57 N/A 1.081±0.19 8.569±0.06 9.689±2.71 46.764±0.26
ENSMUST00000114822 N/A 8.869±0.79 N/A N/A N/A N/A 5.086±0.00 N/A 54.498±5.25 N/A 2.107±0.18 N/A 24.085±9.74 N/A
ENSMUST00000114823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 64.566±21.14
ENSMUST00000122874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000122996 N/A N/A N/A 16.214±0.20 N/A N/A N/A N/A N/A N/A N/A N/A 4.306±0.00 N/A
ENSMUST00000146785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 43.577±0.00 32.705±0.05 338.357±0.00
ENSMUSG00000029923 ENSMUST00000031986 1.102±0.62 0.363±0.12 3.585±0.34 0.038±0.02 1.406±0.69 2.884±0.65 0.294±0.06 1.107±0.26 0.149±0.08 2.373±0.44 0.090±0.06 1.082±0.45 0.284±0.14 0.316±0.15

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