C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00034W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165152-ENSG00000155827 CGP 9606 9:101473171-101563344
GeneTranscriptPositionBiotype
ENSG00000155827 (RNF20)
ring finger protein 20, E3 ubiquitin protein ligase
ENST00000374819 (RNF20-007) 101533888-101540890 protein_coding
ENST00000389120 (RNF20-001) 101533851-101563344 protein_coding
ENST00000466817 (RNF20-006) 101533979-101540628 protein_coding
ENST00000478072 (RNF20-008) 101560681-101561452 retained_intron
ENST00000479306 (RNF20-004) 101533905-101540370 protein_coding
ENST00000481046 (RNF20-005) 101533958-101540279 processed_transcript
ENSG00000165152 (TMEM246)
transmembrane protein 246
ENST00000374847 (TMEM246-002) 101473171-101487117 protein_coding
ENST00000374848 (TMEM246-001) 101473171-101487193 protein_coding
ENST00000374851 (TMEM246-003) 101473171-101533448 protein_coding
ENST00000482920 (TMEM246-004) 101531235-101533537 processed_transcript
ENSG00000233055 (RP11-490D19.8)
ENST00000418219 (RP11-490D19.8-001) 101501643-101501885 processed_pseudogene
CIL_00034W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039611-ENSMUSG00000028309 CGP 10090 4:49584506-49656887
GeneTranscriptPositionBiotype
ENSMUSG00000028309 (Rnf20)
ring finger protein 20
ENSMUST00000029989 (Rnf20-001) 49632066-49656887 protein_coding
ENSMUST00000126675 (Rnf20-003) 49632159-49642959 processed_transcript
ENSMUST00000131962 (Rnf20-008) 49650263-49652826 processed_transcript
ENSMUST00000132782 (Rnf20-004) 49632137-49640013 processed_transcript
ENSMUST00000138490 (Rnf20-009) 49650968-49652550 processed_transcript
ENSMUST00000140341 (Rnf20-006) 49632006-49638702 protein_coding
ENSMUST00000146547 (Rnf20-005) 49632093-49644539 protein_coding
ENSMUST00000149862 (Rnf20-007) 49641718-49648439 processed_transcript
ENSMUST00000156314 (Rnf20-002) 49632060-49650251 protein_coding
ENSMUST00000167496 (Rnf20-201) 49632060-49656886 protein_coding
ENSMUSG00000039611 (Tmem246)
transmembrane protein 246
ENSMUST00000042750 (Tmem246-001) 49584506-49597876 protein_coding
ENSMUST00000150664 (Tmem246-002) 49586766-49597470 protein_coding
ENSMUST00000151542 (Tmem246-003) 49587052-49593890 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00034W_0001ENSG00000155827ENST00000374819ENST00000389120ENST00000466817ENST00000478072ENST00000479306ENST00000481046ENSG00000165152ENST00000374847ENST00000374848ENST00000374851ENST00000482920ENSG00000233055ENST00000418219CIL_00034W_0002ENSMUSG00000028309ENSMUST00000029989ENSMUST00000126675ENSMUST00000131962ENSMUST00000132782ENSMUST00000138490ENSMUST00000140341ENSMUST00000146547ENSMUST00000149862ENSMUST00000156314ENSMUST00000167496ENSMUSG00000039611ENSMUST00000042750ENSMUST00000150664ENSMUST00000151542
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00034W_0001ENSG00000155827ENST00000374819ENST00000389120ENSG00000165152ENST00000374847ENST00000374848ENST00000374851ENSG00000233055ENST00000418219CIL_00034W_0002ENSMUSG00000028309ENSMUST00000029989ENSMUST00000131962ENSMUST00000146547ENSMUST00000156314ENSMUST00000167496ENSMUSG00000039611ENSMUST00000042750ENSMUST00000150664
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000155827 ENST00000374819 N/A N/A N/A N/A N/A 4.417±0.00 N/A 3.922±0.00 N/A N/A N/A 5.868±0.00 N/A N/A
ENST00000389120 10.234±0.00 6.176±0.00 2.840±0.00 7.889±4.08 6.909±5.43 8.217±5.58 5.388±4.50 5.830±5.38 4.799±1.53 3.857±0.09 9.235±8.59 9.893±5.42 7.850±3.03 24.685±3.64
ENST00000466817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000165152 ENST00000374847 N/A N/A N/A N/A 1.127±0.00 N/A N/A N/A N/A 1.142±0.00 N/A 0.613±0.00 N/A N/A
ENST00000374848 1.968±0.00 1.424±0.00 N/A 13.942±1.17 2.658±0.00 3.129±0.11 1.130±0.65 1.780±1.65 1.076±0.03 2.178±0.00 0.644±0.25 3.908±2.50 0.556±0.05 1.655±0.43
ENST00000374851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.305±0.01
ENST00000482920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233055 ENST00000418219 N/A N/A N/A 0.564±0.00 0.119±0.00 N/A 0.110±0.00 0.582±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028309 ENSMUST00000029989 4.950±0.45 2.442±0.67 8.396±0.79 11.474±1.38 4.895±1.74 2.283±0.40 3.847±0.68 3.719±0.62 3.907±1.75 7.629±2.56 3.801±0.72 7.792±3.85 9.809±3.18 4.776±1.00
ENSMUST00000126675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131962 N/A N/A N/A 43.773±0.00 N/A N/A N/A N/A N/A N/A N/A 85.032±0.00 35.093±7.63 N/A
ENSMUST00000132782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138490 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146547 10.959±0.00 20.461±5.71 N/A N/A 12.383±2.22 11.807±2.85 5.962±0.00 8.800±1.97 5.871±2.13 16.282±2.95 N/A 16.189±3.18 N/A 7.133±0.00
ENSMUST00000149862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156314 4.223±1.15 3.305±1.08 N/A 15.594±0.00 5.413±2.53 4.884±1.58 2.175±0.49 1.951±0.34 N/A 4.975±1.40 N/A 7.656±6.43 12.247±3.81 1.627±0.00
ENSMUST00000167496 2.948±1.41 3.711±1.72 3.678±1.46 8.522±1.62 N/A 2.470±0.00 N/A 2.257±0.32 3.716±2.37 2.033±0.00 1.205±0.45 3.384±0.00 3.538±0.51 1.108±0.00
ENSMUSG00000039611 ENSMUST00000042750 2.439±1.36 3.096±0.43 2.796±0.49 10.037±2.41 1.842±0.62 22.778±4.81 8.182±5.71 8.034±3.26 1.625±1.64 10.449±1.66 1.285±1.03 6.175±3.06 0.251±0.14 10.305±6.67
ENSMUST00000150664 N/A 2.761±1.00 N/A N/A 1.396±0.00 22.454±5.88 14.429±3.85 6.469±1.53 0.091±0.00 9.181±1.06 N/A 4.358±0.96 N/A N/A
ENSMUST00000151542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading