C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 20, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374819 RNF20-007 ENSG00000155827 9606 + 9:101533888-101540890 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyOvaryENST00000374819
Transcript ID Colon Kidney Ovary
ENST00000374819 4.417±0.00 3.922±0.00 5.868±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034W CIL_00034W_0001 CGP 9:101473171-101563344
CIL_00034Z CIL_00034Z_0001 CGP 9:101533851-101738580

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167496 Rnf20-201 protein_coding Mus_musculus 0 761
ENSMUST00000132782 Rnf20-004 processed_transcript Mus_musculus 0 761
ENSMUST00000126675 Rnf20-003 processed_transcript Mus_musculus 0 761
ENSMUST00000156314 Rnf20-002 protein_coding Mus_musculus 0 761
ENSMUST00000029989 Rnf20-001 protein_coding Mus_musculus 0 761
ENSMUST00000140341 Rnf20-006 protein_coding Mus_musculus 0 743
ENSMUST00000146547 Rnf20-005 protein_coding Mus_musculus 0 422

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