C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003A7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000059836-ENSDARG00000034396 CGP 7955 6:58818530-58877660
GeneTranscriptPositionBiotype
ENSDARG00000034396 (mars)
methionine-tRNA synthetase 		ENSDART00000144514 (mars-001) 58823881-58877660 protein_coding
ENSDART00000144911 (mars-002) 58823881-58877651 protein_coding
ENSDARG00000059836 (ddit3)
DNA-damage-inducible transcript 3 		ENSDART00000083628 (ddit3-001) 58818530-58821727 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0003A7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025408-ENSMUSG00000040354 CGP 10090 10:127290774-127311786
GeneTranscriptPositionBiotype
ENSMUSG00000025408 (Ddit3)
DNA-damage inducible transcript 3 		ENSMUST00000026475 (Ddit3-001) 127290774-127296288 protein_coding
ENSMUST00000134686 (Ddit3-003) 127290794-127294582 retained_intron
ENSMUST00000139091 (Ddit3-002) 127290793-127296065 protein_coding
ENSMUSG00000040354 (Mars)
methionine-tRNA synthetase 		ENSMUST00000037290 (Mars-001) 127296221-127311786 protein_coding
ENSMUST00000128369 (Mars-003) 127308036-127308973 retained_intron
ENSMUST00000134778 (Mars-004) 127296226-127297764 protein_coding
ENSMUST00000139683 (Mars-005) 127296349-127297675 retained_intron
ENSMUST00000145275 (Mars-002) 127296226-127311678 retained_intron
ENSMUST00000171564 (Mars-201) 127296222-127311786 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003A7_0001ENSDARG00000034396ENSDART00000144514ENSDART00000144911ENSDARG00000059836ENSDART00000083628CIL_0003A7_0002ENSMUSG00000025408ENSMUST00000026475ENSMUST00000134686ENSMUST00000139091ENSMUSG00000040354ENSMUST00000037290ENSMUST00000128369ENSMUST00000134778ENSMUST00000139683ENSMUST00000145275ENSMUST00000171564
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003A7_0001ENSDARG00000034396ENSDART00000144514ENSDART00000144911ENSDARG00000059836ENSDART00000083628CIL_0003A7_0002ENSMUSG00000025408ENSMUST00000026475ENSMUST00000139091ENSMUSG00000040354ENSMUST00000037290ENSMUST00000134778ENSMUST00000145275ENSMUST00000171564
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000034396 ENSDART00000144514 N/A N/A N/A 4.294±0.00 N/A N/A 5.014±3.77 66.170±45.65 4.844±0.00 N/A 1.109±0.00 N/A N/A N/A
ENSDART00000144911 N/A N/A N/A N/A N/A N/A 11.379±7.13 N/A N/A N/A 6.964±0.00 N/A N/A N/A
ENSDARG00000059836 ENSDART00000083628 N/A N/A N/A 6.734±0.27 N/A N/A 16.548±3.87 N/A 3.436±0.00 N/A 13.293±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025408 ENSMUST00000026475 18.013±0.51 35.112±4.10 27.062±1.84 34.667±0.00 19.043±2.50 17.640±2.02 11.079±0.29 15.682±0.91 26.246±9.29 14.748±1.82 16.685±2.66 40.729±9.17 38.401±13.31 56.003±10.26
ENSMUST00000134686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 71.242±0.00
ENSMUSG00000040354 ENSMUST00000037290 22.359±4.51 30.118±2.81 17.043±5.31 9.367±3.19 20.817±3.30 16.869±1.76 7.712±0.58 16.151±1.22 28.873±11.29 15.270±0.66 2.650±0.00 29.724±8.20 20.023±8.90 12.475±3.43
ENSMUST00000128369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134778 N/A N/A N/A 31.652±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 53.988±21.21 N/A
ENSMUST00000139683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145275 6.864±1.90 9.135±1.88 5.188±1.12 9.773±4.05 4.003±0.51 2.660±0.00 2.743±0.63 N/A 6.372±1.88 2.864±0.46 2.969±0.20 7.104±2.81 5.134±0.00 N/A
ENSMUST00000171564 N/A 23.140±7.14 N/A 4.860±0.09 6.304±1.00 N/A 4.903±1.13 N/A 8.099±0.00 N/A 17.160±1.80 N/A N/A N/A

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