C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 6161
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121942 Gm6161-001 ENSMUSG00000081441 10090 + 1:9574548-9575649 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121942
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121942 0.136±0.02 1.277±0.12 1.220±0.05 0.084±0.00 0.160±0.00 0.062±0.02 0.116±0.05 1.029±1.83 0.119±0.02 0.060±0.04 0.151±0.11 0.058±0.02 0.279±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GC CIL_0003GC_0002 CGP 1:9545408-9580673
CIL_00031D CIL_00031D_0002 CGP 1:9547948-9627143

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392524 HNRNPA3-001 protein_coding Homo_sapiens 0 1650
ENST00000397093 RP3-522P13.2-001 processed_pseudogene Homo_sapiens 0 261
ENST00000401429 HNRNPA3P1-001 processed_pseudogene Homo_sapiens 0 1513
ENST00000411529 HNRNPA3-002 protein_coding Homo_sapiens 0 1705
ENST00000416838 HNRNPA3P3-001 processed_pseudogene Homo_sapiens 0 1489
ENST00000424470 HNRNPA3P15-001 processed_pseudogene Homo_sapiens 0 1088
ENST00000424736 RP11-512F24.1-001 processed_pseudogene Homo_sapiens 0 992
ENST00000427514 HNRNPA3P4-001 processed_pseudogene Homo_sapiens 0 987
ENST00000432457 HNRNPA3-008 protein_coding Homo_sapiens 0 230
ENST00000435711 HNRNPA3-014 protein_coding Homo_sapiens 0 1650
ENST00000437410 HNRNPA3P12-001 processed_pseudogene Homo_sapiens 0 1426
ENST00000441511 AC012513.4-001 processed_pseudogene Homo_sapiens 0 1029
ENST00000444546 HNRNPA3P14-001 processed_pseudogene Homo_sapiens 0 717
ENST00000451198 HNRNPA3P2-001 unprocessed_pseudogene Homo_sapiens 0 457
ENST00000455201 HNRNPA3P5-001 processed_pseudogene Homo_sapiens 0 1221
ENST00000472163 HNRNPA3P6-001 processed_pseudogene Homo_sapiens 0 979
ENST00000507583 RP11-395I6.1-001 processed_pseudogene Homo_sapiens 4e-24 113
ENST00000512222 HNRNPA3P13-001 processed_pseudogene Homo_sapiens 0 1273
ENST00000547726 HNRNPA3P10-001 processed_pseudogene Homo_sapiens 0 1493
ENST00000564298 HNRNPA3P11-001 processed_pseudogene Homo_sapiens 0 1018
ENST00000591842 HNRNPA3P16-001 processed_pseudogene Homo_sapiens 0 774
ENST00000604913 HNRNPA3P9-001 processed_pseudogene Homo_sapiens 0 741
ENST00000619693 CTD-3093M3.1-001 unprocessed_pseudogene Homo_sapiens 4e-21 102

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