C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: plexin A3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154062 Plxna3-002 ENSMUSG00000031398 10090 + X:74332457-74344683 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000154062
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000154062 1.083±0.65 1.238±0.00 0.648±0.00 10.821±0.00 1.621±0.00 1.002±0.17 0.272±0.08 0.221±0.06 0.625±0.05 0.079±0.06 1.638±0.08 0.188±0.11 0.063±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006K8 CIL_0006K8_0002 CGP X:74313033-74344689
CIL_0003LD CIL_0003LD_0002 CGP X:74329066-74353618

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000016230 plxna4-001 protein_coding Danio_rerio 0 597
ENST00000321063 PLXNA4-201 protein_coding Homo_sapiens 0 876
ENST00000359827 PLXNA4-001 protein_coding Homo_sapiens 0 876
ENST00000367033 PLXNA2-001 protein_coding Homo_sapiens 0 994
ENST00000369682 PLXNA3-001 protein_coding Homo_sapiens 0 2270
ENST00000393409 PLXNA1-001 protein_coding Homo_sapiens 0 1301
ENST00000463510 PLXNA2-004 processed_transcript Homo_sapiens 0 289
ENST00000467463 PLXNA3-005 processed_transcript Homo_sapiens 0 364
ENST00000482598 PLXNA3-009 retained_intron Homo_sapiens 0 241
ENST00000493546 PLXNA3-007 processed_transcript Homo_sapiens 0 809
ENST00000496550 PLXNA4-005 retained_intron Homo_sapiens 0 337
ENST00000497802 PLXNA3-002 retained_intron Homo_sapiens 0 520
ENST00000503234 PLXNA1-002 retained_intron Homo_sapiens 0 977
ENST00000505278 PLXNA1-004 processed_transcript Homo_sapiens 0 298

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