C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003QP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100697-ENSG00000165959 CGP 9606 14:95086228-95319906
GeneTranscriptPositionBiotype
ENSG00000100697 (DICER1)
dicer 1, ribonuclease type III 		ENST00000343455 (DICER1-001) 95086228-95157422 protein_coding
ENST00000393063 (DICER1-201) 95086229-95141718 protein_coding
ENST00000526495 (DICER1-004) 95086228-95158010 protein_coding
ENST00000527414 (DICER1-006) 95090321-95136810 protein_coding
ENST00000527416 (DICER1-010) 95088665-95091322 processed_transcript
ENST00000527554 (DICER1-011) 95090665-95091422 retained_intron
ENST00000529206 (DICER1-005) 95129061-95157486 retained_intron
ENST00000529720 (DICER1-003) 95132611-95157270 protein_coding
ENST00000531162 (DICER1-002) 95132611-95157270 protein_coding
ENST00000532458 (DICER1-009) 95113130-95124275 processed_transcript
ENST00000532939 (DICER1-008) 95095346-95103430 protein_coding
ENST00000541352 (DICER1-016) 95090492-95133467 protein_coding
ENST00000554367 (DICER1-015) 95103708-95106236 retained_intron
ENST00000556045 (DICER1-014) 95090468-95106081 protein_coding
ENST00000556681 (DICER1-013) 95106080-95107773 retained_intron
ENSG00000165959 (CLMN)
calmin (calponin-like, transmembrane) 		ENST00000298912 (CLMN-001) 95181940-95319906 protein_coding
ENST00000553733 (CLMN-009) 95221733-95319878 nonsense_mediated_decay
ENST00000555336 (CLMN-003) 95213225-95296243 protein_coding
ENST00000555615 (CLMN-010) 95213320-95307773 protein_coding
ENST00000556416 (CLMN-007) 95191713-95193917 retained_intron
ENST00000556441 (CLMN-005) 95191531-95194300 protein_coding
ENST00000556454 (CLMN-002) 95191530-95210851 retained_intron
ENST00000557215 (CLMN-008) 95191527-95194395 processed_transcript
ENST00000557696 (CLMN-006) 95191527-95196584 retained_intron
ENSG00000258615 (RP11-725G5.3)
 ENST00000555482 (RP11-725G5.3-001) 95199039-95199345 unprocessed_pseudogene
ENSG00000264607 (MIR3173)
microRNA 3173 		ENST00000580810 (MIR3173-201) 95137919-95137986 miRNA
CIL_0003QP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041415-ENSMUSG00000021097 CGP 10090 12:104687742-104865076
GeneTranscriptPositionBiotype
ENSMUSG00000021097 (Clmn)
calmin 		ENSMUST00000109936 (Clmn-201) 104763114-104865076 protein_coding
ENSMUST00000109937 (Clmn-202) 104763114-104865076 protein_coding
ENSMUSG00000041415 (Dicer1)
dicer 1, ribonuclease type III 		ENSMUST00000041987 (Dicer1-201) 104687742-104751952 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003QP_0001ENSG00000100697ENST00000343455ENST00000393063ENST00000526495ENST00000527414ENST00000527416ENST00000527554ENST00000529206ENST00000529720ENST00000531162ENST00000532458ENST00000532939ENST00000541352ENST00000554367ENST00000556045ENST00000556681ENSG00000165959ENST00000298912ENST00000553733ENST00000555336ENST00000555615ENST00000556416ENST00000556441ENST00000556454ENST00000557215ENST00000557696ENSG00000258615ENST00000555482ENSG00000264607ENST00000580810CIL_0003QP_0002ENSMUSG00000021097ENSMUST00000109936ENSMUST00000109937ENSMUSG00000041415ENSMUST00000041987
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003QP_0001ENSG00000100697ENST00000343455ENST00000393063ENST00000526495ENST00000527414ENST00000556045ENSG00000165959ENST00000298912ENST00000555336ENST00000556454ENST00000557215ENSG00000258615ENST00000555482ENSG00000264607ENST00000580810CIL_0003QP_0002ENSMUSG00000021097ENSMUST00000109936ENSMUST00000109937ENSMUSG00000041415ENSMUST00000041987
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100697 ENST00000343455 2.845±0.00 N/A 2.328±0.00 2.246±0.78 1.783±0.21 1.116±0.56 1.772±1.09 2.673±0.00 4.484±0.00 2.202±1.20 1.031±0.00 3.569±0.68 2.557±1.66 2.328±0.00
ENST00000393063 1.130±0.00 1.759±0.00 2.627±0.00 1.604±0.04 1.948±0.00 N/A 0.675±0.05 N/A 1.632±0.00 2.868±0.00 0.918±0.41 N/A 0.818±0.00 1.817±0.00
ENST00000526495 N/A N/A N/A 1.604±0.00 N/A N/A N/A N/A N/A N/A N/A 1.636±0.00 N/A 1.674±0.00
ENST00000527414 N/A N/A 2.883±0.00 3.891±0.00 7.261±0.00 2.667±0.00 0.679±0.00 3.672±0.00 6.069±0.00 8.219±0.00 2.176±0.00 2.747±1.06 N/A 6.545±0.00
ENST00000527416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.130±0.00 5.352±0.00 8.747±0.00
ENST00000556681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000165959 ENST00000298912 1.433±0.00 1.525±0.00 3.070±0.00 3.720±2.51 3.369±0.76 1.920±0.73 0.986±0.00 5.103±3.12 2.312±2.06 0.871±0.24 0.071±0.00 1.054±0.29 0.436±0.00 1.869±0.22
ENST00000553733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 36.470±0.00
ENST00000555615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556454 3.447±0.00 1.725±0.00 N/A 3.074±1.91 4.757±1.37 3.655±0.00 0.843±0.00 2.487±0.00 4.040±2.86 2.438±0.60 0.717±0.00 1.203±0.27 1.642±0.31 17.756±2.95
ENST00000557215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.249±0.00 N/A N/A
ENST00000557696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258615 ENST00000555482 N/A 0.300±0.00 N/A 0.344±0.00 0.201±0.00 N/A N/A 0.097±0.00 N/A N/A N/A 1.147±0.00 0.536±0.00 1.137±0.00
ENSG00000264607 ENST00000580810 N/A N/A N/A 0.536±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021097 ENSMUST00000109936 2.416±0.54 0.603±0.08 1.684±0.41 2.050±2.34 1.890±0.55 9.503±2.42 0.151±0.09 8.683±0.75 2.939±2.70 1.306±0.21 0.214±0.08 1.757±0.68 0.702±0.34 2.953±0.00
ENSMUST00000109937 0.841±0.43 0.459±0.09 0.457±0.00 0.100±0.00 1.259±0.58 3.067±0.82 0.171±0.10 1.495±0.12 0.771±0.86 0.625±0.07 0.285±0.16 1.138±0.59 0.213±0.11 7.403±0.00
ENSMUSG00000041415 ENSMUST00000041987 5.349±2.26 4.090±1.01 3.955±0.98 8.073±1.50 3.920±1.38 2.368±1.49 1.855±1.04 2.686±1.43 2.575±0.76 4.186±2.04 1.759±0.81 6.180±2.09 5.868±3.35 1.484±0.23

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