C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003WP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000142025-ENSG00000105372 CGP 9606 19:41844743-41872926
GeneTranscriptPositionBiotype
ENSG00000105372 (RPS19)
ribosomal protein S19 		ENST00000221975 (RPS19-005) 41860257-41871416 protein_coding
ENST00000593863 (RPS19-006) 41860446-41871416 protein_coding
ENST00000598261 (RPS19-007) 41860769-41869146 protein_coding
ENST00000598399 (RPS19-008) 41860778-41869192 nonsense_mediated_decay
ENST00000598466 (RPS19-004) 41860255-41861606 retained_intron
ENST00000598742 (RPS19-001) 41859918-41872926 protein_coding
ENST00000600467 (RPS19-002) 41860255-41869087 protein_coding
ENST00000601492 (RPS19-003) 41860255-41869084 protein_coding
ENSG00000142025 (DMRTC2)
DMRT-like family C2 		ENST00000269945 (DMRTC2-001) 41845055-41852333 protein_coding
ENST00000596258 (DMRTC2-006) 41845090-41848485 protein_coding
ENST00000596660 (DMRTC2-007) 41845325-41848832 protein_coding
ENST00000596827 (DMRTC2-003) 41845020-41852028 protein_coding
ENST00000599022 (DMRTC2-008) 41850244-41851648 retained_intron
ENST00000600017 (DMRTC2-004) 41844946-41848844 protein_coding
ENST00000601660 (DMRTC2-002) 41844743-41852327 nonsense_mediated_decay
ENST00000602098 (DMRTC2-005) 41845051-41848819 processed_transcript
ENSG00000276926 (MIR6797)
microRNA 6797 		ENST00000621706 (MIR6797-201) 41869627-41869698 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0003WP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000011349-ENSMUSG00000040952 CGP 10090 7:24870057-24889806
GeneTranscriptPositionBiotype
ENSMUSG00000011349 (Dmrtc2)
doublesex and mab-3 related transcription factor like family C2 		ENSMUST00000011493 (Dmrtc2-001) 24870057-24877651 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003WP_0001ENSG00000105372ENST00000221975ENST00000593863ENST00000598261ENST00000598399ENST00000598466ENST00000598742ENST00000600467ENST00000601492ENSG00000142025ENST00000269945ENST00000596258ENST00000596660ENST00000596827ENST00000599022ENST00000600017ENST00000601660ENST00000602098ENSG00000276926ENST00000621706CIL_0003WP_0002ENSMUSG00000011349ENSMUST00000011493
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003WP_0001ENSG00000105372ENST00000221975ENST00000593863ENST00000598261ENST00000598742ENSG00000142025ENST00000269945ENST00000601660ENSG00000276926ENST00000621706CIL_0003WP_0002ENSMUSG00000011349ENSMUST00000011493
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105372 ENST00000221975 347.291±0.00 920.626±0.00 139.243±0.00 118.194±41.47 430.529±0.00 772.234±297.81 36.965±0.00 226.402±12.01 244.570±0.00 223.895±0.00 173.525±0.00 1317.099±816.90 1537.463±373.99 479.599±41.58
ENST00000593863 140.584±0.00 430.069±0.00 N/A 76.177±0.00 494.370±0.00 N/A 198.989±0.00 203.843±0.00 421.051±0.00 1510.200±0.00 296.341±256.49 245.832±0.00 N/A N/A
ENST00000598261 134.718±0.00 N/A N/A 111.501±0.00 N/A 532.133±0.00 N/A N/A N/A N/A N/A 1179.280±0.00 N/A 325.698±0.00
ENST00000598399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598742 N/A N/A N/A N/A N/A N/A N/A 9.134±0.00 N/A N/A N/A N/A N/A N/A
ENST00000600467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000142025 ENST00000269945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.509±0.00
ENST00000596258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.563±0.00
ENST00000602098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000276926 ENST00000621706 0.530±0.00 0.562±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.802±0.00 N/A 8.095±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000011349 ENSMUST00000011493 0.057±0.03 0.016±0.00 0.005±0.00 0.027±0.00 0.031±0.01 N/A 0.016±0.00 0.032±0.01 0.007±0.00 N/A N/A 0.038±0.01 0.012±0.00 56.123±2.62

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