C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000598399 RPS19-008 ENSG00000105372 9606 + 19:41860778-41869192 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003WP CIL_0003WP_0001 CGP 19:41844743-41872926
CIL_0003W3 CIL_0003W3_0001 CGP 19:41859918-41881372

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000181233 Rps19-ps6-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000091925 Rps19-ps4-001 processed_pseudogene Mus_musculus 0 257
ENSMUST00000168472 Rps19-ps1-001 processed_pseudogene Mus_musculus 0 257
ENSMUST00000100614 Rps19-ps2-001 processed_pseudogene Mus_musculus 0 257
ENSMUST00000124035 Rps19-008 protein_coding Mus_musculus 0 257
ENSMUST00000156372 Rps19-007 protein_coding Mus_musculus 0 257
ENSMUST00000108429 Rps19-006 protein_coding Mus_musculus 0 257
ENSMUST00000153451 Rps19-005 protein_coding Mus_musculus 0 257
ENSMUST00000108428 Rps19-003 protein_coding Mus_musculus 0 257
ENSMUST00000129847 Rps19-004 nonsense_mediated_decay Mus_musculus 0 257
ENSMUST00000108430 Rps19-001 protein_coding Mus_musculus 0 257
ENSMUST00000116122 Rps19-ps7-001 processed_pseudogene Mus_musculus 0 252
ENSMUST00000159750 Rps19-ps10-001 processed_pseudogene Mus_musculus 0 237
ENSMUST00000130335 Rps19-010 processed_transcript Mus_musculus 0 237
ENSMUST00000180745 Rps19-ps5-001 processed_pseudogene Mus_musculus 0 230
ENSMUST00000116174 Rps19-ps3-001 processed_pseudogene Mus_musculus 0 213
ENSMUST00000161787 Rps19-ps9-001 processed_pseudogene Mus_musculus 0 196
ENSMUST00000180714 Rps19-ps8-001 processed_pseudogene Mus_musculus 0 195
ENSMUST00000119684 Gm9516-001 processed_pseudogene Mus_musculus 8.96831e-44 182
ENSMUST00000180504 Rps19-ps13-001 processed_pseudogene Mus_musculus 2.99878e-43 180
ENSMUST00000181937 Rps19-ps12-001 processed_pseudogene Mus_musculus 5.99994e-41 172
ENSMUST00000119674 Gm15504-001 processed_pseudogene Mus_musculus 2e-36 158
ENSMUST00000138662 Rps19-002 retained_intron Mus_musculus 4e-32 143

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