C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00048L_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000175832-ENSG00000005102 CGP 9606 17:43527844-43661954
GeneTranscriptPositionBiotype
ENSG00000005102 (MEOX1)
mesenchyme homeobox 1 		ENST00000318579 (MEOX1-001) 43640388-43661954 protein_coding
ENST00000329168 (MEOX1-201) 43640402-43661563 protein_coding
ENST00000393661 (MEOX1-003) 43641380-43661922 protein_coding
ENST00000549132 (MEOX1-002) 43641379-43661563 protein_coding
ENSG00000067596 (DHX8)
DEAH (Asp-Glu-Ala-His) box polypeptide 8 		ENST00000262415 (DHX8-001) 43483966-43525670 protein_coding
ENST00000540306 (DHX8-002) 43483963-43526786 protein_coding
ENST00000587044 (DHX8-003) 43491194-43526796 retained_intron
ENST00000587574 (DHX8-004) 43522152-43526803 protein_coding
ENST00000589898 (DHX8-006) 43521396-43544463 protein_coding
ENST00000592258 (DHX8-005) 43483865-43492292 nonsense_mediated_decay
ENST00000605777 (DHX8-007) 43484140-43490493 protein_coding
ENSG00000267747 (RP11-392O1.4)
 ENST00000588996 (RP11-392O1.4-001) 43544785-43610338 antisense
ENSG00000278109 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000616636 (Metazoa_SRP.1-461) 43607436-43607723 misc_RNA
CIL_00048L_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017724-ENSMUSG00000001493 CGP 10090 11:101769742-101894374
GeneTranscriptPositionBiotype
ENSMUSG00000001493 (Meox1)
mesenchyme homeobox 1 		ENSMUST00000057054 (Meox1-001) 101877510-101894374 protein_coding
ENSMUSG00000017724 (Etv4)
ets variant 4 		ENSMUST00000017868 (Etv4-002) 101769747-101785371 protein_coding
ENSMUST00000107176 (Etv4-001) 101769747-101785371 protein_coding
ENSMUST00000129160 (Etv4-011) 101773692-101784861 processed_transcript
ENSMUST00000129995 (Etv4-008) 101773862-101784491 processed_transcript
ENSMUST00000131117 (Etv4-009) 101774168-101784388 processed_transcript
ENSMUST00000131862 (Etv4-010) 101773831-101785258 processed_transcript
ENSMUST00000132040 (Etv4-003) 101770354-101772181 processed_transcript
ENSMUST00000137179 (Etv4-006) 101774208-101785310 processed_transcript
ENSMUST00000140970 (Etv4-004) 101774081-101785222 processed_transcript
ENSMUST00000149099 (Etv4-005) 101774168-101785260 processed_transcript
ENSMUST00000154512 (Etv4-007) 101784256-101784848 processed_transcript
ENSMUST00000164750 (Etv4-201) 101769742-101785310 protein_coding
ENSMUSG00000085594 (Gm11551)
predicted gene 11551 		ENSMUST00000147438 (Gm11551-001) 101886237-101891206 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00048L_0001ENSG00000005102ENST00000318579ENST00000329168ENST00000393661ENST00000549132ENSG00000067596ENST00000262415ENST00000540306ENST00000587044ENST00000587574ENST00000589898ENST00000592258ENST00000605777ENSG00000267747ENST00000588996ENSG00000278109ENST00000616636CIL_00048L_0002ENSMUSG00000001493ENSMUST00000057054ENSMUSG00000017724ENSMUST00000017868ENSMUST00000107176ENSMUST00000129160ENSMUST00000129995ENSMUST00000131117ENSMUST00000131862ENSMUST00000132040ENSMUST00000137179ENSMUST00000140970ENSMUST00000149099ENSMUST00000154512ENSMUST00000164750ENSMUSG00000085594ENSMUST00000147438
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00048L_0001ENSG00000005102ENST00000318579ENST00000329168ENST00000393661ENST00000549132ENSG00000067596ENST00000262415ENST00000540306ENSG00000267747ENST00000588996ENSG00000278109ENST00000616636CIL_00048L_0002ENSMUSG00000001493ENSMUST00000057054ENSMUSG00000017724ENSMUST00000017868ENSMUST00000107176ENSMUST00000129160ENSMUST00000129995ENSMUST00000131862ENSMUST00000132040ENSMUST00000137179ENSMUST00000140970ENSMUST00000149099ENSMUST00000154512ENSMUST00000164750ENSMUSG00000085594ENSMUST00000147438
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000005102 ENST00000318579 0.694±0.00 2.135±0.00 N/A N/A 1.665±1.53 N/A 0.532±0.07 N/A 0.520±0.00 0.101±0.00 0.868±0.00 0.300±0.00 0.256±0.00 1.299±0.00
ENST00000329168 N/A 3.395±0.00 N/A N/A 1.420±1.20 2.144±0.00 N/A N/A 0.311±0.00 0.510±0.00 0.358±0.00 0.657±0.00 0.051±0.00 1.974±0.00
ENST00000393661 N/A N/A N/A 0.116±0.00 N/A N/A N/A N/A N/A N/A 1.488±0.00 0.331±0.00 0.139±0.00 N/A
ENST00000549132 N/A N/A N/A N/A N/A N/A N/A N/A 0.019±0.00 0.230±0.00 1.794±0.00 N/A 0.134±0.00 N/A
ENSG00000067596 ENST00000262415 N/A N/A 0.476±0.00 1.443±0.13 2.172±0.00 1.970±0.00 0.735±0.38 1.206±0.18 1.444±0.07 3.054±2.19 3.441±1.91 4.549±1.48 4.931±2.37 2.941±0.00
ENST00000540306 3.560±0.00 N/A 1.573±0.00 1.367±0.18 2.491±0.00 1.767±0.56 0.794±0.21 1.258±0.52 3.002±0.00 2.288±0.00 2.303±0.00 5.059±1.65 4.299±1.45 7.730±2.84
ENST00000587044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267747 ENST00000588996 N/A 0.080±0.00 N/A 0.198±0.00 0.080±0.00 0.196±0.00 0.125±0.00 0.079±0.00 N/A N/A N/A 0.072±0.00 N/A 0.098±0.00
ENSG00000278109 ENST00000616636 0.168±0.00 0.440±0.00 N/A 0.602±0.00 0.480±0.00 0.391±0.00 0.267±0.00 0.273±0.00 0.049±0.00 0.327±0.00 0.295±0.00 0.232±0.05 N/A 1.079±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001493 ENSMUST00000057054 1.005±0.40 0.583±0.27 0.746±0.02 0.248±0.24 2.728±1.17 0.924±0.31 3.810±0.68 1.804±0.22 0.095±0.13 2.391±0.37 0.850±0.36 1.430±1.05 0.115±0.10 0.106±0.02
ENSMUSG00000017724 ENSMUST00000017868 0.167±0.06 0.452±0.18 0.090±0.00 0.778±0.00 0.709±0.11 3.358±1.18 0.034±0.00 N/A 0.096±0.05 0.146±0.05 0.421±0.00 0.490±0.21 0.167±0.17 N/A
ENSMUST00000107176 0.166±0.11 0.378±0.12 0.054±0.00 0.779±0.00 0.828±0.15 2.747±1.08 N/A 0.297±0.09 0.043±0.02 0.112±0.04 N/A 0.438±0.22 0.157±0.06 0.156±0.02
ENSMUST00000129160 0.090±0.00 N/A N/A N/A N/A N/A 0.113±0.00 0.277±0.00 N/A N/A 0.597±0.00 N/A 0.684±0.00 N/A
ENSMUST00000129995 N/A N/A N/A N/A N/A N/A N/A N/A 0.200±0.00 N/A 0.766±0.00 N/A N/A N/A
ENSMUST00000131117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131862 N/A N/A N/A N/A N/A N/A N/A N/A 0.052±0.00 N/A N/A 0.876±0.00 0.112±0.00 N/A
ENSMUST00000132040 N/A N/A N/A 1.239±0.48 N/A N/A 0.104±0.00 N/A 0.126±0.09 N/A 0.435±0.09 N/A 0.147±0.02 0.308±0.05
ENSMUST00000137179 0.213±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140970 N/A N/A N/A N/A N/A N/A 0.147±0.00 N/A 0.042±0.00 N/A 0.319±0.00 N/A N/A N/A
ENSMUST00000149099 N/A 0.991±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.346±0.00 N/A N/A
ENSMUST00000154512 N/A 0.635±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164750 N/A N/A N/A N/A N/A N/A 0.054±0.00 0.167±0.00 0.037±0.03 N/A N/A 0.610±0.51 N/A N/A
ENSMUSG00000085594 ENSMUST00000147438 0.116±0.00 N/A N/A N/A 0.354±0.24 N/A N/A N/A N/A N/A 0.193±0.02 0.165±0.00 0.020±0.00 0.114±0.00

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