C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004AX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000061455-ENSG00000168944 CGP 9606 5:123089121-123423592
GeneTranscriptPositionBiotype
ENSG00000061455 (PRDM6)
PR domain containing 6 		ENST00000407847 (PRDM6-001) 123089121-123194266 protein_coding
ENST00000427739 (PRDM6-004) 123173401-123180319 processed_transcript
ENST00000434521 (PRDM6-003) 123099745-123180285 nonsense_mediated_decay
ENST00000464424 (PRDM6-002) 123099746-123170935 processed_transcript
ENSG00000168944 (CEP120)
centrosomal protein 120kDa 		ENST00000306467 (CEP120-001) 123344885-123423303 protein_coding
ENST00000306481 (CEP120-201) 123344886-123423592 protein_coding
ENST00000328236 (CEP120-202) 123344886-123423592 protein_coding
ENST00000503049 (CEP120-008) 123390909-123393449 retained_intron
ENST00000508138 (CEP120-006) 123345003-123423544 nonsense_mediated_decay
ENST00000508442 (CEP120-002) 123350060-123423592 protein_coding
ENST00000510582 (CEP120-009) 123399252-123423558 protein_coding
ENST00000513565 (CEP120-007) 123346400-123423344 nonsense_mediated_decay
ENST00000515110 (CEP120-005) 123418394-123423324 protein_coding
ENSG00000250539 (KRT8P33)
keratin 8 pseudogene 33 		ENST00000508125 (KRT8P33-001) 123400922-123402344 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0004AX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000069378-ENSMUSG00000048799 CGP 10090 18:53464546-53744547
GeneTranscriptPositionBiotype
ENSMUSG00000048799 (Cep120)
centrosomal protein 120 		ENSMUST00000049811 (Cep120-201) 53681724-53744547 protein_coding
ENSMUSG00000069378 (Prdm6)
PR domain containing 6 		ENSMUST00000091900 (Prdm6-201) 53464546-53575857 protein_coding
ENSMUST00000115398 (Prdm6-003) 53551594-53575857 protein_coding
ENSMUST00000115399 (Prdm6-002) 53472981-53575907 protein_coding
ENSMUST00000154557 (Prdm6-001) 53465051-53575857 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004AX_0001ENSG00000061455ENST00000407847ENST00000427739ENST00000434521ENST00000464424ENSG00000168944ENST00000306467ENST00000306481ENST00000328236ENST00000503049ENST00000508138ENST00000508442ENST00000510582ENST00000513565ENST00000515110ENSG00000250539ENST00000508125CIL_0004AX_0002ENSMUSG00000048799ENSMUST00000049811ENSMUSG00000069378ENSMUST00000091900ENSMUST00000115398ENSMUST00000115399ENSMUST00000154557
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004AX_0001ENSG00000061455ENST00000407847ENST00000434521ENST00000464424ENSG00000168944ENST00000306467ENST00000306481ENST00000328236ENST00000508138ENST00000508442ENST00000513565ENSG00000250539ENST00000508125CIL_0004AX_0002ENSMUSG00000048799ENSMUST00000049811ENSMUSG00000069378ENSMUST00000091900ENSMUST00000115398ENSMUST00000115399ENSMUST00000154557
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000061455 ENST00000407847 N/A 0.148±0.00 N/A 0.060±0.04 0.221±0.00 1.972±0.00 0.051±0.00 0.041±0.04 1.053±1.05 1.053±0.30 0.009±0.00 0.537±0.35 0.859±0.08 0.431±0.00
ENST00000427739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434521 N/A N/A N/A 0.101±0.00 N/A N/A 0.178±0.00 N/A 0.193±0.00 4.916±0.00 0.074±0.00 N/A N/A N/A
ENST00000464424 0.255±0.00 N/A 0.768±0.00 N/A N/A N/A N/A N/A N/A N/A 0.339±0.00 N/A N/A N/A
ENSG00000168944 ENST00000306467 3.495±0.00 3.052±0.00 N/A 2.019±0.85 1.750±0.00 1.986±0.00 1.515±0.82 1.594±0.76 0.702±0.25 1.065±0.06 0.675±0.00 2.380±1.60 1.027±0.66 1.377±0.00
ENST00000306481 N/A N/A N/A 0.630±0.00 0.750±0.00 1.795±0.00 0.190±0.00 0.716±0.00 1.958±0.00 1.802±1.25 0.305±0.07 2.622±1.02 1.572±1.43 6.338±0.00
ENST00000328236 N/A N/A N/A N/A N/A 1.364±0.00 N/A N/A 0.850±0.00 1.016±0.55 1.186±0.00 0.626±0.00 N/A 7.061±0.00
ENST00000503049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508138 N/A N/A N/A N/A 1.119±0.72 N/A N/A N/A N/A 0.299±0.00 N/A N/A N/A N/A
ENST00000508442 N/A N/A N/A 0.995±0.00 1.509±0.00 1.366±0.00 0.608±0.00 N/A 2.055±0.00 N/A 0.540±0.00 0.807±0.00 N/A N/A
ENST00000510582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513565 N/A N/A 0.214±0.00 N/A N/A N/A N/A 0.532±0.00 N/A N/A N/A 0.860±0.00 0.613±0.00 N/A
ENST00000515110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250539 ENST00000508125 0.280±0.00 0.313±0.00 0.911±0.00 0.166±0.15 0.512±0.10 0.918±0.89 0.219±0.10 0.520±0.20 0.634±0.48 0.608±0.34 N/A 0.360±0.14 0.236±0.10 0.614±0.34
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000048799 ENSMUST00000049811 7.411±1.25 4.226±0.71 7.208±0.03 11.044±1.95 6.396±1.52 4.335±0.55 4.853±0.67 5.881±2.08 3.598±1.24 9.379±1.10 3.750±0.32 6.923±2.95 8.702±1.28 26.731±5.26
ENSMUSG00000069378 ENSMUST00000091900 0.107±0.01 0.160±0.04 3.327±0.42 0.261±0.21 1.299±0.41 1.264±0.26 0.338±0.04 0.117±0.06 0.073±0.05 4.133±2.32 N/A 2.796±1.22 0.966±0.46 0.043±0.00
ENSMUST00000115398 0.083±0.00 0.107±0.02 9.911±0.00 0.038±0.00 0.761±0.00 N/A 0.174±0.00 0.066±0.00 0.064±0.04 5.454±0.15 0.043±0.02 1.249±0.74 0.920±0.22 0.290±0.12
ENSMUST00000115399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 0.683±0.37 0.257±0.00 N/A
ENSMUST00000154557 0.068±0.01 N/A 3.789±0.00 0.375±0.00 0.415±0.00 0.380±0.00 0.196±0.02 0.014±0.00 0.071±0.02 N/A N/A 0.825±0.40 0.583±0.29 0.107±0.01

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