C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 8 pseudogene 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000508125 KRT8P33-001 ENSG00000250539 9606 - 5:123400922-123402344 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000508125
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000508125 0.280±0.00 0.313±0.00 0.911±0.00 0.166±0.15 0.512±0.10 0.918±0.89 0.219±0.10 0.520±0.20 0.634±0.48 0.608±0.34 0.360±0.14 0.236±0.10 0.614±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AX CIL_0004AX_0001 CGP 5:123089121-123423592
CIL_0004B8 CIL_0004B8_0001 CGP 5:123344885-123617045

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023952 Krt8-201 protein_coding Mus_musculus 0 1358
ENSMUST00000023714 4732456N10Rik-001 protein_coding Mus_musculus 0 534
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 505
ENSMUST00000068904 Krt7-001 protein_coding Mus_musculus 0 435
ENSMUST00000023788 Krt6a-201 protein_coding Mus_musculus 0 361
ENSMUST00000023786 Krt6b-201 protein_coding Mus_musculus 0 344
ENSMUST00000100179 Krt76-001 protein_coding Mus_musculus 0 326
ENSMUST00000131069 Krt7-002 retained_intron Mus_musculus 0 322
ENSMUST00000023799 Krt79-001 protein_coding Mus_musculus 0 268
ENSMUST00000023720 Krt84-201 protein_coding Mus_musculus 0 226
ENSMUST00000100184 Gm5478-201 protein_coding Mus_musculus 1e-37 161
ENSMUST00000087996 Krt77-001 protein_coding Mus_musculus 1e-37 161
ENSMUST00000147662 Krt7-003 protein_coding Mus_musculus 1e-37 161
ENSMUST00000077902 Gfap-201 protein_coding Mus_musculus 2e-17 95
ENSMUST00000067444 Gfap-001 protein_coding Mus_musculus 2e-17 95
ENSDART00000028270 gfap-001 protein_coding Danio_rerio 0.0000005 60

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