C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Tia1 cytotoxic granule-associated RNA binding protein-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141079 Tial1-007 ENSMUSG00000030846 10090 - 7:128442267-128461652 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000141079
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000141079 10.306±2.11 15.534±5.11 18.935±3.42 25.740±6.88 9.287±0.98 8.754±3.37 6.651±0.77 4.837±0.73 13.298±6.62 9.610±1.36 3.875±0.52 19.875±4.89 8.056±0.94 5.897±0.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003IZ CIL_0003IZ_0002 CGP 7:128373621-128461717
CIL_0004GP CIL_0004GP_0003 CGP 7:128439777-128546977

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000022799 tial1-001 protein_coding Danio_rerio 0 571
ENST00000369086 TIAL1-013 protein_coding Homo_sapiens 0 536
ENST00000369087 TIAL1-002 retained_intron Homo_sapiens 0 1061
ENST00000369093 TIAL1-005 protein_coding Homo_sapiens 0 1160
ENST00000412524 TIAL1-012 protein_coding Homo_sapiens 0 826
ENST00000436547 TIAL1-009 protein_coding Homo_sapiens 0 1443
ENST00000462373 TIAL1-011 processed_transcript Homo_sapiens 2e-38 161
ENST00000463089 TIAL1-004 processed_transcript Homo_sapiens 0 754
ENST00000470635 TIAL1-001 processed_transcript Homo_sapiens 0 259
ENST00000470781 TIAL1-008 retained_intron Homo_sapiens 0 2398
ENST00000479729 TIAL1-010 nonsense_mediated_decay Homo_sapiens 0 298
ENST00000489822 TIAL1-006 retained_intron Homo_sapiens 0 2963
ENST00000495821 TIAL1-003 retained_intron Homo_sapiens 0 383
ENST00000497671 TIAL1-007 nonsense_mediated_decay Homo_sapiens 0 1120

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