C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004I8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000157315-ENSG00000132604 CGP 9606 16:69343248-69408571
GeneTranscriptPositionBiotype
ENSG00000132604 (TERF2)
telomeric repeat binding factor 2 		ENST00000254942 (TERF2-001) 69355561-69385988 protein_coding
ENST00000564982 (TERF2-009) 69367081-69372355 nonsense_mediated_decay
ENST00000566051 (TERF2-008) 69356334-69361471 protein_coding
ENST00000566257 (TERF2-013) 69367049-69384747 protein_coding
ENST00000566750 (TERF2-006) 69366935-69385570 protein_coding
ENST00000567130 (TERF2-010) 69361352-69366984 retained_intron
ENST00000567296 (TERF2-002) 69370211-69385988 protein_coding
ENST00000567841 (TERF2-003) 69372269-69408571 protein_coding
ENST00000569280 (TERF2-005) 69370534-69385733 nonsense_mediated_decay
ENST00000569542 (TERF2-012) 69366947-69384650 protein_coding
ENST00000569584 (TERF2-011) 69364967-69372282 protein_coding
ENST00000569611 (TERF2-004) 69368508-69385599 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0004I8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031919-ENSMUSG00000031921 CGP 10090 8:107061484-107096547
GeneTranscriptPositionBiotype
ENSMUSG00000031919 (Tmed6)
transmembrane emp24 protein transport domain containing 6 		ENSMUST00000034393 (Tmed6-201) 107061484-107065644 protein_coding
ENSMUSG00000031921 (Terf2)
telomeric repeat binding factor 2 		ENSMUST00000068388 (Terf2-003) 107069928-107096514 protein_coding
ENSMUST00000068421 (Terf2-201) 107069402-107096545 protein_coding
ENSMUST00000116425 (Terf2-002) 107075517-107096547 protein_coding
ENSMUST00000133925 (Terf2-001) 107069400-107096545 protein_coding
ENSMUST00000136178 (Terf2-006) 107079437-107083217 retained_intron
ENSMUST00000141205 (Terf2-005) 107076319-107079875 retained_intron
ENSMUST00000142616 (Terf2-004) 107069402-107096190 nonsense_mediated_decay
ENSMUST00000155834 (Terf2-007) 107079428-107081441 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004I8_0001ENSG00000132604ENST00000254942ENST00000564982ENST00000566051ENST00000566257ENST00000566750ENST00000567130ENST00000567296ENST00000567841ENST00000569280ENST00000569542ENST00000569584ENST00000569611CIL_0004I8_0002ENSMUSG00000031919ENSMUST00000034393ENSMUSG00000031921ENSMUST00000068388ENSMUST00000068421ENSMUST00000116425ENSMUST00000133925ENSMUST00000136178ENSMUST00000141205ENSMUST00000142616ENSMUST00000155834
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004I8_0001ENSG00000132604ENST00000254942CIL_0004I8_0002ENSMUSG00000031919ENSMUST00000034393ENSMUSG00000031921ENSMUST00000068388ENSMUST00000068421ENSMUST00000116425ENSMUST00000133925ENSMUST00000142616
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132604 ENST00000254942 N/A N/A N/A 13.883±9.18 N/A 16.649±0.00 N/A N/A N/A N/A 42.335±0.00 18.950±3.26 13.299±3.13 18.326±0.00
ENST00000564982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031919 ENSMUST00000034393 1.036±0.11 N/A 0.010±0.00 0.019±0.00 N/A 3.175±0.86 0.039±0.00 30.138±1.02 1.191±0.37 0.505±0.11 N/A 0.319±0.23 0.487±0.39 34.292±21.23
ENSMUSG00000031921 ENSMUST00000068388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.634±0.00 N/A 4.957±0.00
ENSMUST00000068421 1.104±0.00 1.852±0.73 3.059±1.05 5.181±2.18 1.712±0.00 1.731±0.53 1.128±0.53 2.320±0.84 1.615±1.44 2.397±0.04 2.023±0.40 2.428±0.81 2.716±0.84 3.146±0.98
ENSMUST00000116425 1.171±0.28 1.974±0.40 1.820±0.00 3.230±0.21 1.380±0.38 0.994±0.40 N/A 1.360±0.73 1.483±1.16 1.561±0.44 0.844±0.02 1.900±1.06 3.900±1.89 N/A
ENSMUST00000133925 2.197±0.99 1.444±0.55 2.159±0.60 6.183±0.84 1.614±0.54 0.905±0.12 0.944±0.07 1.402±0.73 1.535±0.88 2.768±0.75 1.575±0.77 3.536±1.45 4.726±2.06 1.589±0.29
ENSMUST00000136178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142616 N/A 1.517±0.00 N/A 1.844±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.820±0.00 N/A
ENSMUST00000155834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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