C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004OX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000096995-ENSDARG00000045641 CGP 7955 25:27593808-27619900
GeneTranscriptPositionBiotype
ENSDARG00000096995 (fbxl22)
F-box and leucine-rich repeat protein 22 		ENSDART00000067114 (fbxl22-001) 27593808-27602792 protein_coding
CIL_0004OX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050503-ENSMUSG00000032376 CGP 10090 9:66508459-66593142
GeneTranscriptPositionBiotype
ENSMUSG00000032376 (Usp3)
ubiquitin specific peptidase 3 		ENSMUST00000034940 (Usp3-004) 66517877-66592958 retained_intron
ENSMUST00000098613 (Usp3-002) 66517227-66593036 protein_coding
ENSMUST00000124519 (Usp3-006) 66545462-66566926 retained_intron
ENSMUST00000124694 (Usp3-007) 66526976-66540351 processed_transcript
ENSMUST00000127569 (Usp3-001) 66514637-66593142 protein_coding
ENSMUST00000132255 (Usp3-010) 66518249-66520339 retained_intron
ENSMUST00000139547 (Usp3-003) 66516234-66593000 nonsense_mediated_decay
ENSMUST00000139952 (Usp3-005) 66547867-66576038 processed_transcript
ENSMUST00000150840 (Usp3-009) 66518408-66520820 retained_intron
ENSMUST00000154476 (Usp3-008) 66526661-66530402 retained_intron
ENSMUST00000174387 (Usp3-011) 66518075-66593006 protein_coding
ENSMUSG00000038664 (Herc1)
hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 		ENSMUST00000042824 (Herc1-001) 66350526-66508775 protein_coding
ENSMUST00000124969 (Herc1-004) 66468621-66476745 retained_intron
ENSMUST00000130854 (Herc1-006) 66500254-66507593 retained_intron
ENSMUST00000135159 (Herc1-007) 66451126-66464754 protein_coding
ENSMUST00000135600 (Herc1-005) 66496555-66500520 retained_intron
ENSMUST00000140487 (Herc1-003) 66441911-66452299 retained_intron
ENSMUST00000144280 (Herc1-002) 66350450-66374070 retained_intron
ENSMUSG00000050503 (Fbxl22)
F-box and leucine-rich repeat protein 22 		ENSMUST00000056890 (Fbxl22-201) 66508459-66514593 protein_coding
ENSMUSG00000086387 (Gm15563)
predicted gene 15563 		ENSMUST00000124953 (Gm15563-001) 66572001-66582059 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004OX_0001ENSDARG00000096995ENSDART00000067114CIL_0004OX_0002ENSMUSG00000032376ENSMUST00000034940ENSMUST00000098613ENSMUST00000124519ENSMUST00000124694ENSMUST00000127569ENSMUST00000132255ENSMUST00000139547ENSMUST00000139952ENSMUST00000150840ENSMUST00000154476ENSMUST00000174387ENSMUSG00000038664ENSMUST00000042824ENSMUST00000124969ENSMUST00000130854ENSMUST00000135159ENSMUST00000135600ENSMUST00000140487ENSMUST00000144280ENSMUSG00000050503ENSMUST00000056890ENSMUSG00000086387ENSMUST00000124953
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004OX_0001ENSDARG00000096995ENSDART00000067114CIL_0004OX_0002ENSMUSG00000032376ENSMUST00000034940ENSMUST00000098613ENSMUST00000127569ENSMUST00000139547ENSMUST00000139952ENSMUST00000150840ENSMUST00000174387ENSMUSG00000038664ENSMUST00000042824ENSMUSG00000050503ENSMUST00000056890ENSMUSG00000086387ENSMUST00000124953
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000096995 ENSDART00000067114 N/A N/A N/A N/A N/A N/A 27.118±12.57 1.810±0.57 N/A N/A 1.258±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032376 ENSMUST00000034940 N/A N/A 3.457±0.64 5.281±0.37 N/A N/A N/A N/A 1.741±0.43 N/A 0.880±0.14 N/A 3.388±0.15 2.250±0.43
ENSMUST00000098613 2.888±1.18 13.852±1.55 N/A 4.512±0.00 10.531±4.70 17.631±1.24 1.392±0.04 4.408±1.42 2.708±1.29 6.865±2.47 0.605±0.14 25.140±3.16 N/A 1.335±0.42
ENSMUST00000124519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127569 1.628±0.53 2.105±0.38 4.000±0.15 2.105±1.26 1.870±0.58 2.886±0.25 0.978±0.18 1.536±0.18 1.344±0.30 1.766±0.16 0.320±0.09 6.259±1.53 0.904±0.48 1.305±0.59
ENSMUST00000132255 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139547 4.087±1.30 4.357±0.75 5.086±0.78 10.806±6.72 5.113±2.12 5.562±1.99 1.731±0.11 7.945±0.60 3.017±0.75 4.687±0.15 0.709±0.09 11.047±2.90 2.718±1.28 0.605±0.23
ENSMUST00000139952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.997±5.61 14.794±0.00
ENSMUST00000150840 N/A N/A N/A 9.245±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174387 N/A N/A 3.152±0.00 N/A N/A N/A N/A N/A 1.524±0.04 N/A 1.414±0.31 9.859±2.18 3.521±1.73 3.199±0.00
ENSMUSG00000038664 ENSMUST00000042824 4.427±1.37 4.341±1.43 3.915±1.59 15.066±1.25 5.191±1.44 4.223±1.84 3.588±0.91 3.688±1.45 3.941±2.26 4.530±2.24 2.628±0.61 9.508±2.79 3.574±1.74 5.532±3.14
ENSMUST00000124969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000050503 ENSMUST00000056890 17.126±1.45 1.863±0.00 41.652±0.22 N/A 2.718±0.13 25.800±6.55 26.759±9.84 N/A N/A 4.877±0.58 N/A 51.734±17.88 4.495±0.00 N/A
ENSMUSG00000086387 ENSMUST00000124953 0.137±0.00 0.385±0.04 0.159±0.04 0.227±0.17 N/A N/A N/A 0.132±0.00 0.161±0.10 N/A 0.113±0.03 0.315±0.00 0.203±0.06 0.156±0.00

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