C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004Q6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000179364-ENSG00000226174 CGP 9606 14:105300563-105450106
GeneTranscriptPositionBiotype
ENSG00000179364 (PACS2)
phosphofurin acidic cluster sorting protein 2 		ENST00000325438 (PACS2-003) 105314415-105395206 protein_coding
ENST00000430725 (PACS2-002) 105300563-105394672 protein_coding
ENST00000447393 (PACS2-001) 105314744-105398147 protein_coding
ENST00000546915 (PACS2-007) 105336425-105367250 protein_coding
ENST00000547217 (PACS2-006) 105314887-105394869 protein_coding
ENST00000547903 (PACS2-011) 105381924-105391598 retained_intron
ENST00000548265 (PACS2-008) 105314890-105348746 retained_intron
ENST00000548796 (PACS2-013) 105390237-105393335 retained_intron
ENST00000549030 (PACS2-010) 105388622-105391749 retained_intron
ENST00000550790 (PACS2-012) 105392005-105393543 retained_intron
ENST00000551692 (PACS2-005) 105368085-105395213 retained_intron
ENST00000551743 (PACS2-004) 105383119-105395251 protein_coding
ENST00000551801 (PACS2-014) 105391459-105394743 protein_coding
ENST00000552138 (PACS2-009) 105355049-105370158 retained_intron
ENSG00000182979 (MTA1)
metastasis associated 1 		ENST00000331320 (MTA1-001) 105419822-105470729 protein_coding
ENST00000405646 (MTA1-003) 105419938-105470729 protein_coding
ENST00000406191 (MTA1-002) 105419892-105470729 protein_coding
ENST00000424723 (MTA1-006) 105438715-105460800 nonsense_mediated_decay
ENST00000426567 (MTA1-012) 105468109-105470207 protein_coding
ENST00000434050 (MTA1-007) 105458344-105470729 protein_coding
ENST00000435036 (MTA1-201) 105419820-105470727 protein_coding
ENST00000438610 (MTA1-004) 105420016-105470238 nonsense_mediated_decay
ENST00000469140 (MTA1-021) 105463553-105467192 retained_intron
ENST00000481012 (MTA1-009) 105438672-105463231 retained_intron
ENST00000481206 (MTA1-015) 105468975-105470230 retained_intron
ENST00000481635 (MTA1-014) 105469467-105470238 retained_intron
ENST00000490198 (MTA1-010) 105460881-105465183 retained_intron
ENST00000494026 (MTA1-016) 105449043-105458371 retained_intron
ENST00000494981 (MTA1-013) 105469069-105470297 protein_coding
ENST00000498644 (MTA1-017) 105449240-105460953 protein_coding
ENST00000550551 (MTA1-022) 105460894-105464702 protein_coding
ENST00000550808 (MTA1-020) 105463259-105464567 retained_intron
ENST00000551236 (MTA1-018) 105420019-105454298 nonsense_mediated_decay
ENST00000552286 (MTA1-011) 105465334-105470542 retained_intron
ENSG00000242085 (RPS20P33)
ribosomal protein S20 pseudogene 33 		ENST00000476081 (RPS20P33-001) 105374618-105374971 processed_pseudogene
ENSG00000251602 (RP11-521B24.3)
 ENST00000504332 (RP11-521B24.3-001) 105417581-105419739 antisense
ENST00000551271 (RP11-521B24.3-002) 105416884-105419739 antisense
ENSG00000279495 (RP11-521B24.4)
 ENST00000624831 (RP11-521B24.4-001) 105370418-105372918 TEC
CIL_0004Q6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021143-ENSMUSG00000012211 CGP 10090 12:113014508-113088917
GeneTranscriptPositionBiotype
ENSMUSG00000012211 (Tex22)
testis expressed gene 22 		ENSMUST00000012355 (Tex22-001) 113074502-113088914 protein_coding
ENSMUST00000109729 (Tex22-002) 113074756-113088917 protein_coding
ENSMUST00000146107 (Tex22-003) 113074502-113088916 protein_coding
ENSMUST00000155492 (Tex22-004) 113074778-113075371 protein_coding
ENSMUSG00000021143 (Pacs2)
phosphofurin acidic cluster sorting protein 2 		ENSMUST00000084891 (Pacs2-201) 113014508-113074401 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004Q6_0001ENSG00000179364ENST00000325438ENST00000430725ENST00000447393ENST00000551692ENST00000552138ENSG00000182979ENST00000331320ENST00000405646ENST00000406191ENST00000434050ENST00000435036ENST00000438610ENST00000481012ENST00000481206ENST00000494981ENST00000498644ENST00000550551ENSG00000242085ENST00000476081ENSG00000251602ENST00000504332ENST00000551271ENSG00000279495ENST00000624831CIL_0004Q6_0002ENSMUSG00000012211ENSMUST00000012355ENSMUST00000109729ENSMUST00000146107ENSMUST00000155492ENSMUSG00000021143ENSMUST00000084891
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000179364 ENST00000325438 24.319±0.00 17.119±0.00 N/A 20.428±12.91 18.337±15.95 14.312±11.20 7.935±6.10 8.232±6.69 4.177±0.74 16.063±0.00 20.328±15.38 15.916±10.46 13.321±2.98 25.341±3.98
ENST00000430725 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.703±0.00 N/A N/A N/A N/A
ENST00000447393 N/A 5.708±0.00 N/A 8.403±5.72 1.171±0.00 N/A N/A 3.634±0.00 N/A N/A N/A 6.421±0.00 N/A N/A
ENST00000546915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551692 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.433±0.00 N/A N/A N/A N/A
ENST00000551743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552138 N/A N/A N/A N/A 9.914±0.00 N/A N/A N/A N/A N/A N/A 23.765±14.74 36.336±0.00 119.059±0.00
ENSG00000182979 ENST00000331320 N/A N/A N/A 0.495±0.00 1.243±0.00 N/A 3.141±2.21 3.968±0.00 2.665±0.00 0.759±0.00 6.728±0.00 7.847±2.59 4.948±0.58 N/A
ENST00000405646 10.342±0.00 N/A N/A N/A N/A 0.732±0.00 N/A N/A N/A 4.528±0.00 N/A 9.992±0.00 2.858±0.00 N/A
ENST00000406191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.958±0.00 N/A 19.256±3.24
ENST00000424723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434050 N/A 7.529±0.00 N/A 5.333±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435036 N/A N/A N/A 0.690±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438610 12.493±0.00 13.450±0.00 0.401±0.00 5.034±4.15 13.241±0.00 18.494±0.00 6.944±0.00 3.779±3.08 3.664±0.00 9.608±0.00 17.764±0.00 9.818±7.25 8.873±0.63 25.353±0.00
ENST00000469140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481012 N/A N/A N/A 1.783±0.00 3.457±0.00 1.648±0.00 N/A N/A N/A 1.806±0.00 N/A 8.485±0.00 7.137±0.00 32.905±0.00
ENST00000481206 N/A N/A N/A N/A N/A N/A N/A 1.345±0.00 N/A N/A N/A N/A N/A N/A
ENST00000481635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494981 N/A N/A N/A N/A N/A N/A 33.795±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000498644 N/A N/A 1.583±0.00 10.637±0.00 N/A 20.822±0.00 N/A 1.783±0.00 5.209±0.00 N/A 6.923±0.00 N/A N/A N/A
ENST00000550551 N/A N/A N/A N/A N/A 5.765±0.00 N/A N/A N/A N/A 5.214±0.00 N/A N/A N/A
ENST00000550808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000242085 ENST00000476081 0.087±0.00 0.093±0.00 N/A 0.825±0.00 1.650±0.00 0.196±0.07 0.362±0.00 0.186±0.00 0.435±0.11 0.628±0.00 0.241±0.00 0.290±0.05 0.402±0.25 0.212±0.05
ENSG00000251602 ENST00000504332 N/A N/A 0.160±0.00 N/A N/A N/A N/A N/A 0.087±0.00 0.238±0.00 N/A 0.319±0.00 0.084±0.00 1.077±0.00
ENST00000551271 0.301±0.00 0.657±0.00 0.073±0.00 0.477±0.00 0.362±0.00 0.461±0.00 0.152±0.00 0.376±0.00 0.159±0.03 0.556±0.00 0.367±0.00 0.173±0.07 0.169±0.04 0.535±0.00
ENSG00000279495 ENST00000624831 0.728±0.00 0.492±0.00 0.585±0.00 0.628±0.45 0.627±0.10 0.438±0.10 0.086±0.08 0.273±0.13 0.357±0.18 0.403±0.20 0.170±0.03 0.454±0.36 1.239±0.19 0.625±0.12
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000012211 ENSMUST00000012355 0.073±0.07 0.172±0.05 0.020±0.01 0.027±0.00 0.123±0.00 N/A N/A N/A 0.009±0.00 0.111±0.00 N/A 0.072±0.01 0.013±0.00 19.853±1.35
ENSMUST00000109729 N/A 0.046±0.01 N/A 0.091±0.00 0.077±0.01 N/A 0.076±0.00 0.098±0.01 0.024±0.02 0.122±0.00 0.095±0.00 0.115±0.03 0.017±0.00 119.722±53.23
ENSMUST00000146107 N/A 0.233±0.12 N/A 0.064±0.02 0.200±0.03 0.109±0.06 0.090±0.03 0.073±0.01 0.035±0.03 0.082±0.01 N/A 0.227±0.09 0.013±0.00 32.668±14.09
ENSMUST00000155492 N/A N/A N/A N/A N/A N/A N/A N/A 0.093±0.00 N/A N/A N/A N/A 228.005±0.00
ENSMUSG00000021143 ENSMUST00000084891 15.856±1.04 20.637±3.05 14.728±0.11 26.970±8.91 14.646±2.13 10.156±1.43 8.720±1.60 12.125±0.86 5.881±1.77 15.188±1.62 8.400±1.08 13.769±3.09 7.805±4.11 25.306±8.74

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