C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A3 pseudogene 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000604913 HNRNPA3P9-001 ENSG00000270903 9606 - 11:32591793-32592771 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000604913
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000604913 0.138±0.00 0.235±0.00 0.362±0.00 0.117±0.01 0.099±0.00 0.361±0.00 0.318±0.16 0.151±0.00 0.068±0.05 0.046±0.00 0.140±0.00 0.101±0.07 0.038±0.00 0.061±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004RH CIL_0004RH_0002 CGP 11:32387775-32606262
CIL_0008SB CIL_0008SB_0001 VISTA 11:32486574-33087503

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120017 Gm12960-001 processed_pseudogene Mus_musculus 0 754
ENSMUST00000117582 Gm5940-001 processed_pseudogene Mus_musculus 0 741
ENSMUST00000121942 Gm6161-001 processed_pseudogene Mus_musculus 0 741
ENSMUST00000091130 Gm5641-201 protein_coding Mus_musculus 0 736
ENSMUST00000090792 Hnrnpa3-201 protein_coding Mus_musculus 0 736
ENSMUST00000164947 Hnrnpa3-202 protein_coding Mus_musculus 0 736
ENSMUST00000111962 Hnrnpa3-001 protein_coding Mus_musculus 0 736
ENSMUST00000111964 Hnrnpa3-002 protein_coding Mus_musculus 0 736
ENSMUST00000168178 Gm6254-001 processed_pseudogene Mus_musculus 0 734
ENSMUST00000177820 Gm9242-201 protein_coding Mus_musculus 0 730
ENSMUST00000161973 Gm6397-001 processed_pseudogene Mus_musculus 0 713
ENSMUST00000125165 Gm11847-001 processed_pseudogene Mus_musculus 0 712
ENSMUST00000117287 Gm14398-001 processed_pseudogene Mus_musculus 0 702
ENSMUST00000071732 Gm6793-201 protein_coding Mus_musculus 0 702
ENSMUST00000119652 Gm11991-001 processed_pseudogene Mus_musculus 0 697
ENSMUST00000166043 Gm17082-001 processed_pseudogene Mus_musculus 0 682
ENSMUST00000032395 Gm7399-001 processed_pseudogene Mus_musculus 0 658
ENSMUST00000119775 Gm6506-001 processed_pseudogene Mus_musculus 0 645
ENSMUST00000119643 Gm6758-001 processed_pseudogene Mus_musculus 0 641
ENSMUST00000122378 Gm14730-001 processed_pseudogene Mus_musculus 0 640
ENSMUST00000172004 Gm6153-001 processed_pseudogene Mus_musculus 0 640
ENSMUST00000119765 Gm9431-001 processed_pseudogene Mus_musculus 0 634
ENSMUST00000189662 RP23-472J11.2-001 processed_pseudogene Mus_musculus 0 608
ENSMUST00000117756 Gm12194-001 processed_pseudogene Mus_musculus 0 608
ENSMUST00000111961 Hnrnpa3-003 protein_coding Mus_musculus 0 569
ENSMUST00000120104 Gm12129-001 processed_pseudogene Mus_musculus 0 544
ENSMUST00000073014 Gm8991-201 protein_coding Mus_musculus 0 508
ENSMUST00000089593 Gm7551-201 processed_pseudogene Mus_musculus 0 438
ENSMUST00000119442 Gm13369-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000120487 Gm12229-001 processed_pseudogene Mus_musculus 0 383
ENSMUST00000121177 Gm5383-001 processed_pseudogene Mus_musculus 0 270

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