C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15710
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121821 Gm15710-001 ENSMUSG00000084111 10090 - 5:92140294-92140929 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000121821
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000121821 0.064±0.01 0.105±0.03 0.154±0.03 7.075±9.82 0.124±0.00 0.173±0.11 0.054±0.00 0.055±0.00 9.205±20.35 0.300±0.26 0.472±0.26 0.246±0.19 0.058±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051O CIL_00051O_0004 CGP 5:92052146-92202794

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311528 RPL13-001 protein_coding Homo_sapiens 0 710
ENST00000392730 RPL13P12-001 processed_pseudogene Homo_sapiens 0 699
ENST00000393099 RPL13-002 protein_coding Homo_sapiens 0 710
ENST00000396818 RPL13P-001 processed_pseudogene Homo_sapiens 0 442
ENST00000399461 RPL13-003 retained_intron Homo_sapiens 0 579
ENST00000412023 RPL13P5-002 processed_transcript Homo_sapiens 0 300
ENST00000413822 RPL13P-001 processed_pseudogene Homo_sapiens 0 436
ENST00000421824 RPL13P5-004 processed_transcript Homo_sapiens 2e-29 134
ENST00000427418 RPL13P-001 processed_pseudogene Homo_sapiens 0 436
ENST00000431236 RPL13P-001 processed_pseudogene Homo_sapiens 0 436
ENST00000440069 RPL13P-001 processed_pseudogene Homo_sapiens 0 442
ENST00000440687 RPL13P2-001 processed_pseudogene Homo_sapiens 0 390
ENST00000441655 RPL13P5-001 transcribed_processed_pseudogene Homo_sapiens 0 298
ENST00000451612 RPL13P5-003 processed_transcript Homo_sapiens 0.00000000003 73
ENST00000452368 RPL13-015 protein_coding Homo_sapiens 0 298
ENST00000467736 RPL13-006 protein_coding Homo_sapiens 0 453
ENST00000473114 RP11-333A23.2-001 processed_pseudogene Homo_sapiens 0 298
ENST00000474329 CTD-2086L14.1-001 processed_pseudogene Homo_sapiens 0 440
ENST00000484610 RPL13-004 retained_intron Homo_sapiens 0 440
ENST00000491523 RPL13-005 retained_intron Homo_sapiens 0 444
ENST00000562879 RPL13-011 nonsense_mediated_decay Homo_sapiens 0 420
ENST00000563270 RPL13-016 protein_coding Homo_sapiens 0 558
ENST00000565571 RPL13-018 retained_intron Homo_sapiens 0 507
ENST00000567815 RPL13-009 protein_coding Homo_sapiens 0 710
ENST00000593989 RPL13P-001 processed_pseudogene Homo_sapiens 0 442
ENST00000608758 RPL13P-001 processed_pseudogene Homo_sapiens 0 442
ENST00000609856 RPL13P-001 processed_pseudogene Homo_sapiens 0 442

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