C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00052R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000059246-ENSDARG00000003429 CGP 7955 10:5004025-5027922
GeneTranscriptPositionBiotype
ENSDARG00000003429 (hnrpdl)
heterogeneous nuclear ribonucleoprotein D-like 		ENSDART00000020631 (hnrpdl-001) 5020618-5027922 protein_coding
ENSDART00000132284 (hnrpdl-004) 5023588-5025816 processed_transcript
ENSDART00000137853 (hnrpdl-005) 5023679-5027687 processed_transcript
ENSDART00000146539 (hnrpdl-003) 5021960-5023902 processed_transcript
ENSDART00000148277 (hnrpdl-002) 5020618-5025578 protein_coding
ENSDARG00000059246 (hnrnpd)
heterogeneous nuclear ribonucleoprotein D 		ENSDART00000101414 (hnrnpd-001) 5004025-5020399 protein_coding
ENSDART00000123048 (hnrnpd-201) 5004027-5020233 protein_coding
ENSDART00000138843 (hnrnpd-002) 5007394-5013677 retained_intron
CIL_00052R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138668-ENSG00000152795 CGP 9606 4:82352498-82430225
GeneTranscriptPositionBiotype
ENSG00000138668 (HNRNPD)
heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 		ENST00000313899 (HNRNPD-001) 82352498-82373956 protein_coding
ENST00000352301 (HNRNPD-003) 82353834-82373983 protein_coding
ENST00000353341 (HNRNPD-002) 82353829-82373986 protein_coding
ENST00000503822 (HNRNPD-007) 82358758-82374161 protein_coding
ENST00000507010 (HNRNPD-008) 82357403-82374144 protein_coding
ENST00000508119 (HNRNPD-012) 82354847-82357392 processed_transcript
ENST00000509107 (HNRNPD-009) 82359516-82373985 protein_coding
ENST00000509263 (HNRNPD-011) 82356554-82373150 protein_coding
ENST00000513584 (HNRNPD-004) 82355249-82373991 nonsense_mediated_decay
ENST00000514325 (HNRNPD-006) 82353829-82358842 retained_intron
ENST00000514671 (HNRNPD-005) 82353834-82359639 nonsense_mediated_decay
ENST00000515432 (HNRNPD-010) 82357437-82374503 protein_coding
ENSG00000152795 (HNRNPDL)
heterogeneous nuclear ribonucleoprotein D-like 		ENST00000295470 (HNRNPDL-001) 82422564-82429866 protein_coding
ENST00000349655 (HNRNPDL-005) 82424629-82429447 nonsense_mediated_decay
ENST00000502762 (HNRNPDL-002) 82424629-82430225 nonsense_mediated_decay
ENST00000507721 (HNRNPDL-004) 82424625-82429397 protein_coding
ENST00000514511 (HNRNPDL-003) 82425583-82429425 nonsense_mediated_decay
ENST00000602300 (HNRNPDL-006) 82424629-82429441 protein_coding
ENST00000614627 (HNRNPDL-201) 82422565-82430225 protein_coding
ENST00000621267 (HNRNPDL-202) 82422565-82430225 protein_coding
ENSG00000250325 (IGBP1P4)
immunoglobulin (CD79A) binding protein 1 pseudogene 4 		ENST00000503202 (IGBP1P4-001) 82401578-82402456 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00052R_0001ENSDARG00000003429ENSDART00000020631ENSDART00000132284ENSDART00000137853ENSDART00000146539ENSDART00000148277ENSDARG00000059246ENSDART00000101414ENSDART00000123048ENSDART00000138843CIL_00052R_0002ENSG00000138668ENST00000313899ENST00000352301ENST00000353341ENST00000503822ENST00000507010ENST00000508119ENST00000509107ENST00000509263ENST00000513584ENST00000514325ENST00000514671ENST00000515432ENSG00000152795ENST00000295470ENST00000349655ENST00000502762ENST00000507721ENST00000514511ENST00000602300ENST00000614627ENST00000621267ENSG00000250325ENST00000503202
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00052R_0001ENSDARG00000003429ENSDART00000020631ENSDART00000146539ENSDART00000148277ENSDARG00000059246ENSDART00000101414ENSDART00000123048ENSDART00000138843CIL_00052R_0002ENSG00000138668ENST00000313899ENST00000352301ENST00000353341ENST00000509107ENST00000509263ENST00000513584ENST00000514325ENST00000514671ENSG00000152795ENST00000295470ENST00000349655ENST00000507721ENST00000514511ENST00000602300ENST00000621267ENSG00000250325ENST00000503202
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000003429 ENSDART00000020631 N/A N/A N/A N/A N/A N/A N/A N/A 1.625±0.00 N/A 13.957±0.00 N/A N/A N/A
ENSDART00000132284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000146539 N/A N/A N/A 87.331±0.00 N/A N/A 112.461±0.00 N/A 5.290±0.00 N/A N/A N/A N/A N/A
ENSDART00000148277 N/A N/A N/A 44.563±0.00 N/A N/A 101.796±60.73 103.725±30.83 2.800±0.00 N/A 58.000±0.00 N/A N/A N/A
ENSDARG00000059246 ENSDART00000101414 N/A N/A N/A 27.663±4.66 N/A N/A 16.227±6.64 13.272±5.12 1.134±0.00 N/A 3.856±0.00 N/A N/A N/A
ENSDART00000123048 N/A N/A N/A 21.995±0.72 N/A N/A 4.797±1.87 1.620±0.72 0.482±0.00 N/A 2.076±0.00 N/A N/A N/A
ENSDART00000138843 N/A N/A N/A 34.899±13.22 N/A N/A 9.311±1.52 27.653±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138668 ENST00000313899 N/A N/A N/A 8.154±0.00 N/A N/A N/A N/A N/A 1.672±0.00 3.481±0.00 5.502±3.88 N/A N/A
ENST00000352301 71.173±0.00 62.535±0.00 N/A 37.346±0.00 34.028±0.00 47.447±0.00 9.764±8.96 17.106±0.00 13.182±0.00 37.200±0.00 8.978±7.19 68.337±21.21 44.154±4.58 59.885±0.00
ENST00000353341 95.507±0.00 96.553±0.00 4.503±0.00 28.696±26.66 38.794±32.30 40.003±33.47 14.828±13.55 28.267±24.40 13.742±9.75 25.221±0.00 17.864±0.00 92.207±59.10 79.219±19.28 74.647±8.22
ENST00000503822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 189.281±0.00 N/A
ENST00000509263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 168.053±0.00 148.153±0.00 89.687±0.00
ENST00000513584 N/A N/A N/A N/A N/A N/A N/A 21.177±0.00 N/A N/A N/A N/A N/A N/A
ENST00000514325 N/A N/A N/A N/A 2.376±0.00 2.960±0.00 N/A N/A N/A N/A N/A 1.444±0.00 N/A N/A
ENST00000514671 N/A N/A N/A 2.109±0.00 N/A N/A 1.278±0.00 4.429±0.00 9.345±0.00 19.377±0.00 5.991±4.13 6.075±0.00 N/A N/A
ENST00000515432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000152795 ENST00000295470 N/A N/A 2.289±0.00 6.036±1.10 N/A N/A 1.689±0.00 7.660±0.00 7.748±0.00 4.205±0.00 0.884±0.00 17.293±3.37 10.603±7.82 N/A
ENST00000349655 N/A N/A N/A N/A 5.345±0.00 5.935±0.00 2.861±0.00 N/A N/A 16.472±0.00 11.256±7.67 19.930±0.00 10.055±0.00 N/A
ENST00000502762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507721 6.126±0.00 13.787±0.00 1.930±0.00 8.793±1.99 6.553±1.76 4.021±0.84 7.785±0.00 17.711±0.00 7.079±0.00 13.440±5.20 1.450±0.00 24.370±0.00 5.381±1.08 N/A
ENST00000514511 N/A N/A 7.150±0.00 10.429±0.00 5.401±0.00 7.866±0.00 N/A 6.442±0.00 N/A N/A N/A N/A N/A N/A
ENST00000602300 60.322±0.00 156.162±0.00 11.304±0.00 67.561±28.49 28.634±15.10 18.147±5.49 29.640±18.70 20.748±13.92 27.528±2.80 45.229±13.87 22.080±15.26 87.249±30.77 54.454±23.49 152.128±9.00
ENST00000614627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621267 6.007±0.00 14.745±0.00 N/A 10.026±0.00 5.018±0.00 N/A N/A N/A 2.610±0.00 6.193±0.00 N/A 22.575±0.00 4.179±0.00 N/A
ENSG00000250325 ENST00000503202 N/A 0.017±0.00 N/A 0.034±0.00 N/A 0.169±0.15 N/A N/A N/A N/A 0.029±0.00 0.037±0.00 0.021±0.00 0.250±0.10

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