C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00055F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000049618-ENSG00000215712 CGP 9606 6:156777929-157323601
GeneTranscriptPositionBiotype
ENSG00000215712 (TMEM242)
transmembrane protein 242 		ENST00000367144 (TMEM242-002) 157318181-157323601 protein_coding
ENST00000400788 (TMEM242-001) 157289386-157323601 protein_coding
ENSG00000217783 (LDHAL6FP)
lactate dehydrogenase A-like 6F, pseudogene 		ENST00000405916 (LDHAL6FP-001) 157299045-157300126 processed_pseudogene
ENSG00000218596 (RP11-2J18.1)
 ENST00000406202 (RP11-2J18.1-001) 156976294-156977072 processed_pseudogene
ENSG00000233044 (RP1-137K2.2)
 ENST00000442936 (RP1-137K2.2-001) 157107727-157119706 antisense
ENSG00000270487 (RP11-230C9.3)
 ENST00000604792 (RP11-230C9.3-001) 156780327-156780455 antisense
CIL_00055F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000069729-ENSMUSG00000004945 CGP 10090 17:4994332-5440259
GeneTranscriptPositionBiotype
ENSMUSG00000004945 (Tmem242)
transmembrane protein 242 		ENSMUST00000005053 (Tmem242-001) 5410870-5440243 protein_coding
ENSMUST00000185896 (Tmem242-003) 5433025-5440256 protein_coding
ENSMUST00000188282 (Tmem242-002) 5432295-5440259 protein_coding
ENSMUSG00000069729 (Arid1b)
AT rich interactive domain 1B (SWI-like) 		ENSMUST00000092723 (Arid1b-002) 4994939-5343505 protein_coding
ENSMUST00000115797 (Arid1b-201) 4995074-5347656 protein_coding
ENSMUST00000115799 (Arid1b-001) 4996421-5347656 protein_coding
ENSMUST00000124362 (Arid1b-005) 4994332-5097733 processed_transcript
ENSMUST00000146703 (Arid1b-003) 5040578-5127640 retained_intron
ENSMUST00000156775 (Arid1b-004) 4996429-5098186 retained_intron
ENSMUSG00000081783 (Gm15599)
predicted gene 15599 		ENSMUST00000122283 (Gm15599-001) 5110781-5112119 unprocessed_pseudogene
ENSMUSG00000095747 (Gm22475)
predicted gene, 22475 		ENSMUST00000175169 (Gm22475-201) 5421464-5421565 miRNA
ENSMUSG00000101133 (RP23-52K8.2)
predicted gene 29050 		ENSMUST00000190732 (RP23-52K8.2-001) 5404121-5419652 antisense
ENSMUST00000190865 (RP23-52K8.2-002) 5388763-5417396 antisense
ENSMUSG00000101959 (Ldhal6b)
lactate dehydrogenase A-like 6B 		ENSMUST00000189788 (Ldhal6b-001) 5417323-5418767 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00055F_0001ENSG00000215712ENST00000367144ENST00000400788ENSG00000217783ENST00000405916ENSG00000218596ENST00000406202ENSG00000233044ENST00000442936ENSG00000270487ENST00000604792CIL_00055F_0002ENSMUSG00000004945ENSMUST00000005053ENSMUST00000185896ENSMUST00000188282ENSMUSG00000069729ENSMUST00000092723ENSMUST00000115797ENSMUST00000115799ENSMUST00000124362ENSMUST00000146703ENSMUST00000156775ENSMUSG00000081783ENSMUST00000122283ENSMUSG00000095747ENSMUST00000175169ENSMUSG00000101133ENSMUST00000190732ENSMUST00000190865ENSMUSG00000101959ENSMUST00000189788
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00055F_0001ENSG00000215712ENST00000367144ENST00000400788ENSG00000217783ENST00000405916ENSG00000218596ENST00000406202ENSG00000233044ENST00000442936ENSG00000270487ENST00000604792CIL_00055F_0002ENSMUSG00000004945ENSMUST00000005053ENSMUST00000185896ENSMUST00000188282ENSMUSG00000069729ENSMUST00000092723ENSMUST00000115797ENSMUST00000115799ENSMUST00000124362ENSMUSG00000081783ENSMUST00000122283ENSMUSG00000095747ENSMUST00000175169ENSMUSG00000101133ENSMUST00000190732ENSMUST00000190865ENSMUSG00000101959ENSMUST00000189788
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000215712 ENST00000367144 N/A N/A N/A N/A 1.182±0.00 0.801±0.00 N/A N/A 1.116±0.00 1.086±0.00 N/A 2.314±0.00 N/A N/A
ENST00000400788 2.340±0.00 2.743±0.00 0.954±0.00 4.024±1.30 1.541±0.72 2.185±1.53 1.642±0.91 2.760±1.30 1.270±0.58 1.369±0.21 1.412±0.24 2.981±0.99 2.431±0.17 2.650±1.37
ENSG00000217783 ENST00000405916 N/A N/A 0.052±0.00 0.027±0.00 0.113±0.06 0.196±0.00 0.043±0.02 0.155±0.05 0.199±0.00 0.029±0.00 0.659±0.00 0.070±0.00 N/A 2.234±1.56
ENSG00000218596 ENST00000406202 0.079±0.00 0.094±0.00 N/A 0.043±0.00 1.263±1.18 N/A N/A 0.972±0.80 0.148±0.00 N/A 1.137±1.10 2.116±1.57 N/A 0.122±0.03
ENSG00000233044 ENST00000442936 0.144±0.00 0.116±0.00 N/A N/A N/A N/A 0.075±0.01 N/A N/A N/A N/A 0.060±0.00 0.063±0.00 0.075±0.05
ENSG00000270487 ENST00000604792 N/A 0.595±0.00 N/A N/A N/A N/A N/A N/A N/A 5.115±0.00 N/A 0.481±0.00 N/A 0.717±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004945 ENSMUST00000005053 13.547±0.54 10.103±3.74 13.070±0.98 10.839±3.24 4.019±0.51 4.384±0.39 12.281±0.96 15.299±3.00 10.253±2.76 6.394±1.92 59.540±5.60 9.925±12.41 21.406±9.72 10.235±1.33
ENSMUST00000185896 N/A N/A N/A N/A 0.426±0.00 N/A N/A N/A N/A N/A N/A 1.054±0.15 N/A N/A
ENSMUST00000188282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.796±0.09 2.013±0.00 N/A
ENSMUSG00000069729 ENSMUST00000092723 5.888±1.05 9.190±2.70 2.909±0.00 7.589±0.00 6.810±1.83 7.024±0.66 2.818±0.50 5.043±0.69 1.656±0.67 6.560±1.26 2.913±1.05 10.235±2.25 10.535±6.88 1.479±0.27
ENSMUST00000115797 N/A N/A 1.331±0.00 N/A 0.749±0.00 N/A N/A N/A 0.359±0.04 N/A 0.431±0.00 N/A 0.937±0.00 N/A
ENSMUST00000115799 2.986±0.00 7.253±2.96 1.628±0.00 2.003±1.24 3.850±2.25 3.832±1.13 1.612±0.00 3.940±0.96 0.893±0.36 5.339±1.61 0.640±0.06 5.968±2.25 1.534±0.60 0.062±0.00
ENSMUST00000124362 N/A 85.947±8.94 N/A N/A 76.427±12.14 51.555±9.53 N/A N/A N/A N/A N/A 73.356±13.22 N/A N/A
ENSMUST00000146703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081783 ENSMUST00000122283 0.409±0.22 0.198±0.12 0.238±0.00 0.060±0.00 0.335±0.09 0.325±0.22 0.204±0.13 0.151±0.05 0.126±0.11 0.641±0.19 N/A 0.536±0.34 0.146±0.10 0.144±0.09
ENSMUSG00000095747 ENSMUST00000175169 N/A N/A N/A N/A N/A N/A N/A N/A 230.654±111.50 N/A N/A N/A N/A N/A
ENSMUSG00000101133 ENSMUST00000190732 0.042±0.02 0.028±0.00 0.053±0.00 0.041±0.00 0.038±0.02 0.024±0.00 0.012±0.00 0.027±0.00 0.044±0.01 0.042±0.02 0.035±0.02 0.069±0.02 0.034±0.01 N/A
ENSMUST00000190865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.143±0.00 N/A N/A N/A
ENSMUSG00000101959 ENSMUST00000189788 0.241±0.09 0.337±0.23 0.214±0.00 0.227±0.05 0.209±0.09 0.416±0.13 0.207±0.15 0.285±0.13 0.140±0.08 0.223±0.08 0.151±0.07 0.845±0.47 0.213±0.11 308.682±162.79

Loading