C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15599
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122283 Gm15599-001 ENSMUSG00000081783 10090 - 17:5110781-5112119 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000122283
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000122283 0.409±0.22 0.198±0.12 0.238±0.00 0.060±0.00 0.335±0.09 0.325±0.22 0.204±0.13 0.151±0.05 0.126±0.11 0.641±0.19 0.536±0.34 0.146±0.10 0.144±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00055G CIL_00055G_0002 CGP 17:3635240-5347656
CIL_00055F CIL_00055F_0002 CGP 17:4994332-5440259

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295766 TUBA1A-002 protein_coding Homo_sapiens 0 821
ENST00000301071 TUBA1A-001 protein_coding Homo_sapiens 0 821
ENST00000301072 TUBA1C-001 protein_coding Homo_sapiens 0 780
ENST00000332858 TUBA1B-002 retained_intron Homo_sapiens 0 837
ENST00000336023 TUBA1B-001 protein_coding Homo_sapiens 0 837
ENST00000437364 RP11-346M5.1-001 processed_pseudogene Homo_sapiens 0 494
ENST00000445574 RP11-184J23.2-001 processed_pseudogene Homo_sapiens 0 494
ENST00000501221 RP11-447H19.1-001 processed_pseudogene Homo_sapiens 0 608
ENST00000505780 CTD-2158P22.4-001 processed_pseudogene Homo_sapiens 0 466
ENST00000530835 TUBAP2-001 processed_pseudogene Homo_sapiens 0 736
ENST00000541364 TUBA1C-002 protein_coding Homo_sapiens 0 780
ENST00000547765 TUBA1B-006 nonsense_mediated_decay Homo_sapiens 0 837
ENST00000548470 TUBA1C-007 retained_intron Homo_sapiens 0 752
ENST00000550367 TUBA1B-010 protein_coding Homo_sapiens 0 204
ENST00000550767 TUBA1A-006 protein_coding Homo_sapiens 0 821
ENST00000552448 TUBA1C-003 nonsense_mediated_decay Homo_sapiens 0 780
ENST00000559595 RP11-522B15.6-001 processed_pseudogene Homo_sapiens 0 233

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