C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: AT rich interactive domain 1B (SWI-like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124362 Arid1b-005 ENSMUSG00000069729 10090 + 17:4994332-5097733 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonOvaryENSMUST00000124362
Transcript ID Adrenal Breast Colon Ovary
ENSMUST00000124362 85.947±8.94 76.427±12.14 51.555±9.53 73.356±13.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00055G CIL_00055G_0002 CGP 17:3635240-5347656
CIL_00055F CIL_00055F_0002 CGP 17:4994332-5440259

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000346085 ARID1B-001 protein_coding Homo_sapiens 5.60519e-45 189
ENST00000350026 ARID1B-009 protein_coding Homo_sapiens 0 348
ENST00000414678 ARID1B-005 protein_coding Homo_sapiens 0 348
ENST00000494260 ARID1B-008 processed_transcript Homo_sapiens 0 189

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