C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005BE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100983-ENSG00000078814 CGP 9606 20:34928430-35002437
GeneTranscriptPositionBiotype
ENSG00000100983 (GSS)
glutathione synthetase 		ENST00000216951 (GSS-001) 34928430-34955817 protein_coding
ENST00000451957 (GSS-201) 34928828-34951852 protein_coding
ENSG00000100991 (TRPC4AP)
transient receptor potential cation channel, subfamily C, member 4 associated protein 		ENST00000252015 (TRPC4AP-001) 35002404-35092871 protein_coding
ENST00000451813 (TRPC4AP-002) 35002404-35092807 protein_coding
ENSG00000207635 (MIR499A)
microRNA 499a 		ENST00000384903 (MIR499A-201) 34990376-34990497 miRNA
CIL_0005BE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027610-ENSMUSG00000074652 CGP 10090 2:155563181-155634307
GeneTranscriptPositionBiotype
ENSMUSG00000027605 (Acss2)
acyl-CoA synthetase short-chain family member 2 		ENSMUST00000029135 (Acss2-001) 155517948-155562746 protein_coding
ENSMUST00000065973 (Acss2-008) 155518057-155585724 protein_coding
ENSMUST00000103142 (Acss2-003) 155518107-155562080 protein_coding
ENSMUST00000131054 (Acss2-005) 155518069-155552387 retained_intron
ENSMUST00000133654 (Acss2-004) 155518107-155562080 nonsense_mediated_decay
ENSMUST00000143169 (Acss2-007) 155549221-155549858 retained_intron
ENSMUST00000148870 (Acss2-010) 155572862-155576980 retained_intron
ENSMUST00000149788 (Acss2-006) 155518033-155525291 retained_intron
ENSMUST00000151781 (Acss2-002) 155549232-155557364 protein_coding
ENSMUST00000153975 (Acss2-009) 155568550-155585266 processed_transcript
ENSMUSG00000027610 (Gss)
glutathione synthetase 		ENSMUST00000079691 (Gss-001) 155563181-155592810 protein_coding
ENSMUST00000126322 (Gss-005) 155572965-155582662 protein_coding
ENSMUST00000130881 (Gss-002) 155563189-155592714 protein_coding
ENSMUST00000137305 (Gss-006) 155578305-155582654 processed_transcript
ENSMUST00000140860 (Gss-003) 155564211-155574383 retained_intron
ENSMUST00000155347 (Gss-004) 155577593-155592567 protein_coding
ENSMUST00000157008 (Gss-007) 155577522-155587576 retained_intron
ENSMUST00000175993 (Gss-009) 155563489-155573004 protein_coding
ENSMUST00000176415 (Gss-008) 155576786-155592727 processed_transcript
ENSMUSG00000038324 (Trpc4ap)
transient receptor potential cation channel, subfamily C, member 4 associated protein 		ENSMUST00000041059 (Trpc4ap-001) 155634271-155692384 protein_coding
ENSMUST00000103140 (Trpc4ap-002) 155634308-155692332 protein_coding
ENSMUST00000130755 (Trpc4ap-004) 155653104-155692382 retained_intron
ENSMUST00000136764 (Trpc4ap-006) 155673057-155692123 processed_transcript
ENSMUST00000140370 (Trpc4ap-005) 155643594-155663822 retained_intron
ENSMUST00000143115 (Trpc4ap-009) 155635596-155637782 retained_intron
ENSMUST00000146484 (Trpc4ap-008) 155638983-155640540 retained_intron
ENSMUST00000147913 (Trpc4ap-007) 155665882-155668478 retained_intron
ENSMUST00000152548 (Trpc4ap-003) 155638976-155673051 retained_intron
ENSMUST00000153246 (Trpc4ap-010) 155634745-155637736 processed_transcript
ENSMUSG00000074652 (Myh7b)
myosin, heavy chain 7B, cardiac muscle, beta 		ENSMUST00000092995 (Myh7b-001) 155611212-155634307 protein_coding
ENSMUST00000124415 (Myh7b-002) 155629060-155630384 processed_transcript
ENSMUST00000154656 (Myh7b-003) 155633451-155634203 retained_intron
ENSMUSG00000087616 (Gm14257)
predicted gene 14257 		ENSMUST00000144649 (Gm14257-001) 155593565-155594475 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005BE_0001ENSG00000100983ENST00000216951ENST00000451957ENSG00000100991ENST00000252015ENST00000451813ENSG00000207635ENST00000384903CIL_0005BE_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005BE_0001ENSG00000100983ENST00000216951ENST00000451957ENSG00000100991ENST00000252015ENST00000451813ENSG00000207635ENST00000384903CIL_0005BE_0002ENSMUSG00000027605ENSMUST00000029135ENSMUST00000103142ENSMUST00000133654ENSMUST00000151781ENSMUSG00000027610ENSMUST00000079691ENSMUST00000130881ENSMUST00000176415ENSMUSG00000038324ENSMUST00000041059ENSMUST00000103140ENSMUST00000130755ENSMUSG00000074652ENSMUST00000092995ENSMUSG00000087616ENSMUST00000144649
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100983 ENST00000216951 8.548±0.00 15.012±0.00 2.927±0.00 7.588±2.97 7.911±5.80 4.838±0.16 4.160±3.70 25.194±0.00 9.141±8.17 4.523±2.54 5.373±2.39 12.312±5.46 21.256±7.57 8.373±3.93
ENST00000451957 N/A N/A N/A N/A 2.493±0.00 N/A N/A N/A 0.874±0.00 N/A N/A 20.700±15.60 18.123±0.00 10.860±0.00
ENSG00000100991 ENST00000252015 9.530±0.00 6.632±0.00 N/A 8.054±1.47 8.733±5.13 4.682±0.04 4.013±2.54 9.628±5.22 7.247±0.00 6.363±0.00 8.796±2.87 12.198±4.63 20.442±0.59 10.925±1.61
ENST00000451813 9.073±0.00 14.015±0.00 1.035±0.00 9.625±5.66 11.139±0.00 6.526±0.00 4.441±3.16 7.514±0.00 7.147±0.00 4.485±0.00 19.717±0.00 5.914±1.92 9.902±6.39 10.292±2.66
ENSG00000207635 ENST00000384903 N/A 0.918±0.00 N/A N/A 0.370±0.00 N/A N/A N/A N/A N/A N/A 26.332±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027605 ENSMUST00000029135 121.770±14.86 67.671±15.08 9.773±1.60 7.999±1.16 164.660±22.87 38.107±6.88 10.740±3.61 72.996±11.23 60.739±45.17 18.585±5.34 8.629±0.94 13.143±5.66 4.205±2.09 21.934±8.60
ENSMUST00000065973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000103142 N/A N/A N/A N/A N/A N/A 5.722±0.51 N/A N/A N/A 6.809±1.02 N/A N/A N/A
ENSMUST00000131054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133654 56.411±3.38 38.045±0.99 N/A 17.082±0.00 N/A N/A N/A N/A N/A N/A N/A 9.956±1.37 5.720±1.28 13.713±0.00
ENSMUST00000143169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.035±0.00 10.106±0.00 44.982±0.00
ENSMUST00000153975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027610 ENSMUST00000079691 N/A 24.144±2.25 7.860±0.26 N/A N/A 40.430±1.00 5.813±0.78 97.714±5.08 34.558±6.07 16.785±2.94 N/A 8.878±2.08 13.764±10.23 N/A
ENSMUST00000126322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.206±4.32 7.629±1.56 N/A
ENSMUST00000137305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000157008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176415 N/A 61.313±10.88 N/A N/A N/A 58.252±12.80 N/A N/A N/A N/A N/A 15.853±0.44 N/A N/A
ENSMUSG00000038324 ENSMUST00000041059 52.116±4.33 46.406±8.93 33.646±1.89 40.093±18.68 43.796±13.82 55.448±6.60 30.371±5.04 41.222±3.34 30.298±5.74 48.907±3.92 34.603±5.08 72.722±25.02 41.876±17.33 28.306±13.09
ENSMUST00000103140 7.974±0.00 37.358±8.84 N/A 7.505±0.00 11.101±1.79 10.037±0.00 N/A 7.664±1.04 7.901±2.30 N/A 6.498±0.69 11.858±1.81 19.000±5.68 5.813±0.56
ENSMUST00000130755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.340±0.00 N/A
ENSMUST00000136764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000074652 ENSMUST00000092995 N/A N/A N/A N/A N/A N/A 9.232±2.04 N/A 3.020±0.31 N/A 3.522±0.00 N/A N/A N/A
ENSMUST00000124415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087616 ENSMUST00000144649 0.243±0.04 0.129±0.00 0.075±0.02 0.365±0.02 0.051±0.00 0.189±0.04 0.043±0.00 0.370±0.13 0.069±0.03 0.100±0.03 0.660±0.20 0.179±0.06 0.060±0.03 0.266±0.12

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