C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005ET_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000037997-ENSDARG00000086764 CGP 7955 16:11935861-11963017
GeneTranscriptPositionBiotype
ENSDARG00000037997 (tubb5)
tubulin, beta 5
ENSDART00000055380 (tubb5-201) 11935861-11944510 protein_coding
ENSDARG00000086764 (MDC1)
mediator of DNA-damage checkpoint 1
ENSDART00000121966 (MDC1-201) 11947107-11963017 protein_coding
CIL_0005ET_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001525-ENSMUSG00000061607 CGP 10090 17:35833921-35859670
GeneTranscriptPositionBiotype
ENSMUSG00000001525 (Tubb5)
tubulin, beta 5 class I
ENSMUST00000001566 (Tubb5-001) 35833921-35838306 protein_coding
ENSMUST00000134978 (Tubb5-003) 35835901-35838208 protein_coding
ENSMUST00000156050 (Tubb5-002) 35836247-35838217 retained_intron
ENSMUST00000173253 (Tubb5-004) 35835605-35837060 retained_intron
ENSMUSG00000061607 (Mdc1)
mediator of DNA damage checkpoint 1
ENSMUST00000082337 (Mdc1-001) 35841515-35859670 protein_coding
ENSMUST00000174124 (Mdc1-003) 35841676-35846031 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005ET_0001ENSDARG00000037997ENSDART00000055380ENSDARG00000086764ENSDART00000121966CIL_0005ET_0002ENSMUSG00000001525ENSMUST00000001566ENSMUST00000134978ENSMUST00000156050ENSMUST00000173253ENSMUSG00000061607ENSMUST00000082337ENSMUST00000174124
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005ET_0001ENSDARG00000037997ENSDART00000055380ENSDARG00000086764ENSDART00000121966CIL_0005ET_0002ENSMUSG00000001525ENSMUST00000001566ENSMUST00000173253ENSMUSG00000061607ENSMUST00000082337
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000037997 ENSDART00000055380 N/A N/A N/A 64.988±20.64 N/A N/A 0.613±0.29 3.535±0.85 0.269±0.00 N/A 2.177±0.00 N/A N/A N/A
ENSDARG00000086764 ENSDART00000121966 N/A N/A N/A 3.504±1.90 N/A N/A 3.460±1.82 9.852±3.17 0.184±0.00 N/A 0.510±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001525 ENSMUST00000001566 91.922±44.11 93.876±2.55 96.772±11.26 591.399±499.96 169.882±85.85 98.316±42.41 19.323±2.07 22.224±2.32 124.870±143.29 49.232±7.80 8.934±2.40 246.408±73.41 229.364±141.31 10.034±4.15
ENSMUST00000134978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173253 N/A N/A N/A N/A 52.755±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000061607 ENSMUST00000082337 2.150±1.45 2.539±0.68 4.947±0.93 5.322±1.40 2.525±1.02 1.969±0.78 0.736±0.28 1.187±0.56 2.348±2.36 2.580±0.63 0.683±0.21 5.121±3.14 6.740±2.51 13.862±5.79
ENSMUST00000174124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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