C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005II_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000070781-ENSDARG00000057911 CGP 7955 20:10139337-10161149
GeneTranscriptPositionBiotype
ENSDARG00000057911 ()
actin, alpha, cardiac muscle 1 		ENSDART00000080664 () 10151617-10161149 protein_coding
ENSDARG00000070781 (cx35b)
connexin 35b 		ENSDART00000104234 (cx35b-001) 10139337-10144544 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0005II_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000159248-ENSG00000159251 CGP 9606 15:34751032-34796139
GeneTranscriptPositionBiotype
ENSG00000159248 (GJD2)
gap junction protein, delta 2, 36kDa 		ENST00000290374 (GJD2-001) 34751032-34754965 protein_coding
ENSG00000159251 (ACTC1)
actin, alpha, cardiac muscle 1 		ENST00000290378 (ACTC1-001) 34788096-34796139 protein_coding
ENST00000557860 (ACTC1-003) 34791158-34792851 processed_transcript
ENST00000560563 (ACTC1-004) 34791701-34792522 retained_intron
ENSG00000250007 (RP11-814P5.1)
 ENST00000503496 (RP11-814P5.1-001) 34755084-34812923 antisense
ENST00000558707 (RP11-814P5.1-002) 34755162-34790173 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0005II_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000068615-ENSMUSG00000068614 CGP 10090 2:114009601-114053548
GeneTranscriptPositionBiotype
ENSMUSG00000068614 (Actc1)
actin, alpha, cardiac muscle 1 		ENSMUST00000090269 (Actc1-001) 114047282-114052887 protein_coding
ENSMUST00000149125 (Actc1-002) 114051903-114053548 protein_coding
ENSMUSG00000068615 (Gjd2)
gap junction protein, delta 2 		ENSMUST00000090275 (Gjd2-001) 114009601-114013619 protein_coding
ENSMUSG00000092201 (A530058N18Rik)
RIKEN cDNA A530058N18 gene 		ENSMUST00000131299 (A530058N18Rik-001) 114013563-114068324 antisense
ENSMUST00000140041 (A530058N18Rik-002) 114013567-114061498 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005II_0001ENSDARG00000057911ENSDART00000080664ENSDARG00000070781ENSDART00000104234CIL_0005II_0002ENSG00000159248ENST00000290374ENSG00000159251ENST00000290378ENST00000557860ENST00000560563ENSG00000250007ENST00000503496ENST00000558707CIL_0005II_0003ENSMUSG00000068614ENSMUST00000090269ENSMUST00000149125ENSMUSG00000068615ENSMUST00000090275ENSMUSG00000092201ENSMUST00000131299ENSMUST00000140041
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005II_0001ENSDARG00000057911ENSDART00000080664ENSDARG00000070781ENSDART00000104234CIL_0005II_0002ENSG00000159248ENST00000290374ENSG00000159251ENST00000290378ENST00000557860ENSG00000250007ENST00000503496CIL_0005II_0003ENSMUSG00000068614ENSMUST00000090269ENSMUST00000149125ENSMUSG00000068615ENSMUST00000090275ENSMUSG00000092201ENSMUST00000131299ENSMUST00000140041
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000057911 ENSDART00000080664 N/A N/A N/A 0.385±0.18 N/A N/A 295.611±110.12 4.145±0.00 2.790±0.00 N/A 4.309±0.00 N/A N/A N/A
ENSDARG00000070781 ENSDART00000104234 N/A N/A N/A 4.557±0.68 N/A N/A 0.053±0.03 0.033±0.00 N/A N/A 0.153±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000159248 ENST00000290374 N/A N/A 0.063±0.00 0.432±0.24 N/A N/A 0.055±0.01 0.028±0.00 N/A 0.069±0.00 N/A 0.012±0.00 N/A 0.082±0.02
ENSG00000159251 ENST00000290378 0.512±0.00 1.828±0.00 0.029±0.00 0.145±0.00 0.222±0.07 0.223±0.20 487.553±367.86 1.463±0.00 8.394±8.29 1.834±0.26 16.303±11.93 0.223±0.12 1.676±1.12 6.058±5.92
ENST00000557860 1.066±0.00 6.779±0.00 N/A 0.309±0.00 0.846±0.47 0.964±0.00 1216.198±948.33 4.795±0.00 27.069±26.90 4.392±0.00 74.246±0.00 0.635±0.21 3.290±0.37 15.083±14.19
ENST00000560563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250007 ENST00000503496 N/A N/A N/A 0.149±0.05 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.097±0.00
ENST00000558707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000068614 ENSMUST00000090269 0.812±0.15 0.055±0.01 167.921±22.88 3.082±2.35 15.927±15.50 2.513±1.00 10876.800±767.49 1.767±0.13 3.329±9.29 263.991±41.03 79.346±30.10 0.459±0.24 3.693±1.44 0.276±0.02
ENSMUST00000149125 N/A 0.586±0.22 N/A 0.286±0.00 N/A N/A N/A N/A N/A N/A N/A 0.220±0.00 N/A N/A
ENSMUSG00000068615 ENSMUST00000090275 N/A 1.727±0.70 N/A 6.932±4.13 N/A 0.204±0.13 N/A 0.026±0.00 0.023±0.02 N/A N/A N/A 0.009±0.00 0.044±0.02
ENSMUSG00000092201 ENSMUST00000131299 N/A N/A N/A N/A N/A 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.219±0.02 0.020±0.00 N/A N/A

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