C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin, alpha, cardiac muscle 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557860 ACTC1-003 ENSG00000159251 9606 - 15:34791158-34792851 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000557860
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000557860 1.066±0.00 6.779±0.00 0.309±0.00 0.846±0.47 0.964±0.00 1216.198±948.33 4.795±0.00 27.069±26.90 4.392±0.00 74.246±0.00 0.635±0.21 3.290±0.37 15.083±14.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VH CIL_0008VH_0001 VISTA 15:34591431-35191947
CIL_0005II CIL_0005II_0002 CGP 15:34751032-34796139
CIL_0006HF CIL_0006HF_0001 CGP 15:34788096-34969839

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090269 Actc1-001 protein_coding Mus_musculus 0 710
ENSDART00000058629 acta1b-001 protein_coding Danio_rerio 0 568
ENSMUST00000034453 Acta1-201 protein_coding Mus_musculus 0 538

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