C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005SP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000055398-ENSDARG00000026629 CGP 7955 20:26731984-26852157
GeneTranscriptPositionBiotype
ENSDARG00000026629 (gmds)
GDP-mannose 4,6-dehydratase 		ENSDART00000046764 (gmds-001) 26738616-26852157 protein_coding
ENSDART00000103234 (gmds-201) 26739061-26852108 protein_coding
ENSDART00000143267 (gmds-002) 26836916-26852157 protein_coding
ENSDART00000146326 (gmds-003) 26805419-26852129 protein_coding
ENSDARG00000055398 (foxc1b)
forkhead box C1b 		ENSDART00000077753 (foxc1b-001) 26731984-26733938 protein_coding
CIL_0005SP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000054598-ENSG00000112699 CGP 9606 6:1609972-2245692
GeneTranscriptPositionBiotype
ENSG00000054598 (FOXC1)
forkhead box C1 		ENST00000380874 (FOXC1-001) 1609972-1613897 protein_coding
CIL_0005SP_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050295-ENSMUSG00000038372 CGP 10090 13:31806691-32338712
GeneTranscriptPositionBiotype
ENSMUSG00000038372 (Gmds)
GDP-mannose 4, 6-dehydratase 		ENSMUST00000041859 (Gmds-001) 31819579-32338712 protein_coding
ENSMUST00000178294 (Gmds-002) 32099227-32338585 retained_intron
ENSMUST00000178313 (Gmds-003) 32157330-32227241 processed_transcript
ENSMUST00000179717 (Gmds-004) 32225232-32338624 nonsense_mediated_decay
ENSMUSG00000050295 (Foxc1)
forkhead box C1 		ENSMUST00000062292 (Foxc1-001) 31806691-31810643 protein_coding
ENSMUSG00000083149 (Gm11380)
predicted gene 11380 		ENSMUST00000118067 (Gm11380-001) 31884225-31885224 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005SP_0001ENSDARG00000026629ENSDART00000046764ENSDART00000103234ENSDART00000143267ENSDART00000146326ENSDARG00000055398ENSDART00000077753CIL_0005SP_0002ENSG00000054598ENST00000380874CIL_0005SP_0003ENSMUSG00000038372ENSMUST00000041859ENSMUST00000178294ENSMUST00000178313ENSMUST00000179717ENSMUSG00000050295ENSMUST00000062292ENSMUSG00000083149ENSMUST00000118067
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005SP_0001ENSDARG00000026629ENSDART00000046764ENSDART00000103234ENSDART00000143267ENSDART00000146326ENSDARG00000055398ENSDART00000077753CIL_0005SP_0002ENSG00000054598ENST00000380874CIL_0005SP_0003ENSMUSG00000038372ENSMUST00000041859ENSMUST00000179717ENSMUSG00000050295ENSMUST00000062292ENSMUSG00000083149ENSMUST00000118067
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000026629 ENSDART00000046764 N/A N/A N/A 4.829±4.67 N/A N/A 5.158±4.12 9.294±6.58 0.763±0.00 N/A 4.059±0.00 N/A N/A N/A
ENSDART00000103234 N/A N/A N/A N/A N/A N/A 1.278±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143267 N/A N/A N/A 0.106±0.00 N/A N/A 0.172±0.10 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000146326 N/A N/A N/A 0.239±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000055398 ENSDART00000077753 N/A N/A N/A 1.051±0.80 N/A N/A 14.509±0.00 0.337±0.00 0.035±0.00 N/A 1.416±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000054598 ENST00000380874 8.329±0.00 6.627±0.00 2.373±0.00 1.513±0.88 2.671±1.93 1.269±1.00 1.448±0.93 9.096±9.02 0.831±0.68 4.488±3.37 1.204±1.06 3.881±1.36 4.932±1.72 5.778±3.71
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038372 ENSMUST00000041859 6.058±1.04 3.972±1.70 7.155±1.91 7.832±2.02 4.347±1.31 99.671±11.43 1.733±0.17 6.910±0.84 3.080±2.02 5.901±1.49 0.658±0.13 8.549±2.96 11.190±2.98 2.645±0.59
ENSMUST00000178294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000179717 6.978±1.65 N/A N/A N/A 6.019±1.76 171.169±16.95 N/A 7.073±1.16 1.556±0.13 4.238±1.24 N/A 10.543±2.62 N/A N/A
ENSMUSG00000050295 ENSMUST00000062292 1.053±0.11 7.400±1.37 3.810±0.02 2.274±0.88 1.407±0.65 0.381±0.04 1.537±0.46 3.913±0.68 0.036±0.03 1.261±0.14 0.321±0.04 1.937±0.78 0.515±0.24 0.039±0.00
ENSMUSG00000083149 ENSMUST00000118067 0.624±0.22 0.411±0.09 0.822±0.45 1.064±0.05 1.107±0.26 1.344±0.34 0.282±0.09 0.257±0.03 1.058±0.75 1.033±0.27 0.140±0.05 0.842±0.52 4.718±5.35 2.781±0.73

Loading