C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transformation related protein 53 binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147540 Trp53bp1-007 ENSMUSG00000043909 10090 - 2:121198251-121236006 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000147540
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000147540 6.970±2.55 5.875±0.53 7.600±2.28 24.184±1.36 3.739±0.00 2.530±0.17 3.477±0.00 11.183±4.20 3.230±0.00 1.401±0.00 8.237±2.03 7.389±2.81 8.425±1.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YH CIL_0005YH_0002 CGP 2:121158273-121198770
CIL_0005YA CIL_0005YA_0002 CGP 2:121170654-121271407
CIL_0005YB CIL_0005YB_0002 CGP 2:121193281-121310832

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263801 TP53BP1-002 protein_coding Homo_sapiens 0 3404
ENST00000382039 TP53BP1-004 protein_coding Homo_sapiens 0 2440
ENST00000382044 TP53BP1-001 protein_coding Homo_sapiens 0 3404
ENST00000411772 TP53BP1-011 nonsense_mediated_decay Homo_sapiens 0 3404
ENST00000413546 TP53BP1-005 protein_coding Homo_sapiens 0 396
ENST00000414758 TP53BP1-006 processed_transcript Homo_sapiens 0 259
ENST00000417342 TP53BP1-008 nonsense_mediated_decay Homo_sapiens 0 638
ENST00000434561 TP53BP1-009 nonsense_mediated_decay Homo_sapiens 0 614
ENST00000434595 TP53BP1-010 protein_coding Homo_sapiens 0 296
ENST00000450115 TP53BP1-014 protein_coding Homo_sapiens 0 3373
ENST00000476454 TP53BP1-003 retained_intron Homo_sapiens 0 2001
ENST00000564079 TUBGCP4-002 protein_coding Homo_sapiens 0 569
ENST00000571145 TP53BP1-016 processed_transcript Homo_sapiens 0 412
ENST00000572085 TP53BP1-015 retained_intron Homo_sapiens 0 1932
ENST00000605155 TP53BP1-018 processed_transcript Homo_sapiens 0 545

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