C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000670_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000013392-ENSG00000065833 CGP 9606 6:83193379-83431071
GeneTranscriptPositionBiotype
ENSG00000013375 (PGM3)
phosphoglucomutase 3 		ENST00000283977 (PGM3-003) 83168528-83193266 protein_coding
ENST00000503094 (PGM3-007) 83188745-83193265 protein_coding
ENST00000504780 (PGM3-013) 83161150-83172013 nonsense_mediated_decay
ENST00000505470 (PGM3-010) 83182950-83193255 nonsense_mediated_decay
ENST00000506587 (PGM3-002) 83169123-83193914 protein_coding
ENST00000507404 (PGM3-011) 83174437-83176135 retained_intron
ENST00000507554 (PGM3-005) 83187025-83193936 protein_coding
ENST00000508748 (PGM3-006) 83188617-83193293 protein_coding
ENST00000509219 (PGM3-014) 83169521-83175982 protein_coding
ENST00000510258 (PGM3-009) 83181762-83193234 protein_coding
ENST00000512866 (PGM3-004) 83166130-83193231 protein_coding
ENST00000513973 (PGM3-001) 83164873-83193293 protein_coding
ENST00000515333 (PGM3-008) 83190510-83193248 retained_intron
ENST00000605602 (PGM3-015) 83188503-83188645 protein_coding
ENST00000616566 (PGM3-201) 83164873-83193293 protein_coding
ENSG00000013392 (RWDD2A)
RWD domain containing 2A 		ENST00000369724 (RWDD2A-001) 83193379-83198932 protein_coding
ENSG00000065833 (ME1)
malic enzyme 1, NADP(+)-dependent, cytosolic 		ENST00000369705 (ME1-001) 83210389-83431071 protein_coding
ENSG00000219951 (RP11-378G13.2)
 ENST00000403475 (RP11-378G13.2-001) 83392416-83393409 processed_pseudogene
ENSG00000252309 (AL391416.1)
 ENST00000516500 (AL391416.1-201) 83367706-83367791 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_000670_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032417-ENSMUSG00000032418 CGP 10090 9:86571991-86695953
GeneTranscriptPositionBiotype
ENSMUSG00000032417 (Rwdd2a)
RWD domain containing 2A 		ENSMUST00000034988 (Rwdd2a-001) 86572016-86574899 protein_coding
ENSMUST00000179212 (Rwdd2a-002) 86572053-86574840 protein_coding
ENSMUST00000185566 (Rwdd2a-003) 86571991-86574733 protein_coding
ENSMUSG00000032418 (Me1)
malic enzyme 1, NADP(+)-dependent, cytosolic 		ENSMUST00000034989 (Me1-001) 86581371-86695953 protein_coding
ENSMUST00000185374 (Me1-002) 86581406-86687277 protein_coding
ENSMUST00000189847 (Me1-004) 86613541-86618737 processed_transcript
ENSMUST00000189968 (Me1-003) 86582686-86618704 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000670_0001ENSG00000013375ENST00000283977ENST00000503094ENST00000504780ENST00000505470ENST00000506587ENST00000507404ENST00000507554ENST00000508748ENST00000509219ENST00000510258ENST00000512866ENST00000513973ENST00000515333ENST00000605602ENST00000616566ENSG00000013392ENST00000369724ENSG00000065833ENST00000369705ENSG00000219951ENST00000403475ENSG00000252309ENST00000516500CIL_000670_0002ENSMUSG00000032417ENSMUST00000034988ENSMUST00000179212ENSMUST00000185566ENSMUSG00000032418ENSMUST00000034989ENSMUST00000185374ENSMUST00000189847ENSMUST00000189968
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000670_0001ENSG00000013375ENST00000283977ENST00000506587ENST00000512866ENST00000513973ENST00000616566ENSG00000013392ENST00000369724ENSG00000065833ENST00000369705ENSG00000219951ENST00000403475ENSG00000252309ENST00000516500CIL_000670_0002ENSMUSG00000032417ENSMUST00000034988ENSMUST00000179212ENSMUST00000185566ENSMUSG00000032418ENSMUST00000034989ENSMUST00000185374ENSMUST00000189968
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000013375 ENST00000283977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.611±0.33 N/A
ENST00000503094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.032±0.00 N/A N/A
ENST00000507404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512866 4.706±0.00 N/A N/A N/A 3.758±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513973 2.803±0.00 2.454±0.00 N/A 3.252±0.00 3.113±0.00 2.403±0.36 1.244±0.58 1.937±0.45 5.262±0.00 2.013±0.00 1.049±0.00 4.483±0.82 4.379±1.24 5.861±0.00
ENST00000515333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616566 N/A N/A 1.326±0.00 N/A N/A N/A N/A 1.115±0.00 N/A N/A 0.287±0.00 N/A N/A N/A
ENSG00000013392 ENST00000369724 1.371±0.00 1.400±0.00 0.482±0.00 3.612±1.65 1.127±0.00 0.713±0.02 0.661±0.35 1.447±0.57 0.711±0.09 0.534±0.31 0.300±0.21 1.047±0.39 0.771±0.10 3.944±0.73
ENSG00000065833 ENST00000369705 7.570±0.00 3.555±0.00 0.426±0.00 5.998±1.02 18.765±14.46 3.704±0.17 3.851±2.41 2.248±0.88 4.376±1.02 2.854±0.43 6.796±0.00 5.948±3.07 1.187±0.36 7.565±0.23
ENSG00000219951 ENST00000403475 N/A N/A N/A 0.090±0.00 N/A N/A 0.063±0.03 N/A 0.195±0.18 0.034±0.00 0.669±0.00 0.056±0.00 0.045±0.00 0.151±0.00
ENSG00000252309 ENST00000516500 N/A N/A N/A N/A 0.298±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032417 ENSMUST00000034988 0.510±0.00 2.806±0.95 N/A 0.670±0.20 0.154±0.00 N/A N/A 0.165±0.00 0.074±0.02 0.167±0.03 0.084±0.03 0.953±0.25 0.383±0.11 4.899±0.51
ENSMUST00000179212 0.226±0.00 11.107±6.21 N/A 4.632±0.00 N/A 0.792±0.43 0.387±0.02 0.406±0.00 0.266±0.15 1.365±0.00 0.137±0.02 2.216±1.22 0.949±0.28 N/A
ENSMUST00000185566 0.963±0.41 1.691±0.40 0.653±0.07 1.672±0.54 1.135±0.46 1.054±0.86 0.150±0.02 0.541±0.18 0.357±0.22 1.046±0.28 0.131±0.02 2.691±1.50 1.360±0.65 24.280±7.00
ENSMUSG00000032418 ENSMUST00000034989 224.349±46.09 247.709±70.17 48.890±3.86 9.610±3.99 156.581±73.04 5.750±1.13 33.918±1.64 79.519±4.43 18.874±18.87 23.656±4.42 77.364±7.69 116.599±58.17 17.791±5.40 66.651±15.91
ENSMUST00000185374 90.408±5.15 110.458±10.29 N/A N/A 157.584±69.71 N/A N/A N/A 5.882±0.61 13.110±5.04 N/A 44.105±11.55 N/A N/A
ENSMUST00000189847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189968 100.185±0.00 N/A N/A 22.062±0.00 102.331±0.00 N/A 13.571±0.00 35.615±0.00 19.409±15.60 15.191±0.07 N/A 149.701±119.46 28.114±15.24 62.713±40.98

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