C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 80
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000077196 Krt80-201 ENSMUSG00000037185 10090 - 15:101349571-101370125 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainLiverMuscleOvaryPlacentaTestisENSMUST00000077196
Transcript ID Adrenal Bladder Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000077196 0.267±0.08 0.428±0.00 1.219±1.67 0.055±0.05 0.315±0.17 1.767±1.30 6.882±0.78 0.133±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JR CIL_0006JR_0002 CGP 15:101284301-101370125
CIL_0006TB CIL_0006TB_0002 CGP 15:101349571-101430313

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005737 IEA cytoplasm
GO:0045095 IEA keratin filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252242 KRT5-001 protein_coding Homo_sapiens 3.00018e-42 178
ENST00000252245 KRT75-001 protein_coding Homo_sapiens 4e-30 137
ENST00000257901 KRT85-001 protein_coding Homo_sapiens 7e-18 97
ENST00000293525 KRT86-201 protein_coding Homo_sapiens 6e-23 113
ENST00000313234 KRT80-001 protein_coding Homo_sapiens 0 1323
ENST00000327741 KRT81-001 protein_coding Homo_sapiens 3e-21 108
ENST00000394815 KRT80-002 protein_coding Homo_sapiens 0 1461
ENST00000423955 KRT86-001 protein_coding Homo_sapiens 7e-23 113
ENST00000466011 KRT80-003 retained_intron Homo_sapiens 0 789
ENST00000529785 KRT87P-001 processed_transcript Homo_sapiens 2e-22 111
ENST00000534226 KRT87P-002 transcribed_unprocessed_pseudogene Homo_sapiens 2e-22 111
ENST00000544265 KRT85-002 protein_coding Homo_sapiens 4e-18 97
ENST00000547890 KRT5-010 retained_intron Homo_sapiens 3e-32 143
ENST00000548409 KRT5-008 protein_coding Homo_sapiens 8.99634e-43 178
ENST00000549264 KRT90P-001 unprocessed_pseudogene Homo_sapiens 3e-17 94
ENST00000549511 KRT5-009 retained_intron Homo_sapiens 8.00141e-43 178
ENST00000552629 KRT5-002 retained_intron Homo_sapiens 1.99965e-42 178
ENST00000615839 KRT81-201 protein_coding Homo_sapiens 2e-21 108
ENST00000620027 KRT123P-001 transcribed_unprocessed_pseudogene Homo_sapiens 1e-17 95

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