C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006RL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000244405-ENSG00000058866 CGP 9606 3:186046308-186362237
GeneTranscriptPositionBiotype
ENSG00000058866 (DGKG)
diacylglycerol kinase, gamma 90kDa 		ENST00000265022 (DGKG-001) 186147201-186362237 protein_coding
ENST00000344484 (DGKG-004) 186149237-186361988 protein_coding
ENST00000382164 (DGKG-003) 186149457-186361957 protein_coding
ENST00000437018 (DGKG-011) 186267685-186280714 protein_coding
ENST00000447054 (DGKG-008) 186105668-186164967 processed_transcript
ENST00000466466 (DGKG-009) 186306708-186320488 retained_intron
ENST00000472506 (DGKG-006) 186267608-186275653 retained_intron
ENST00000480809 (DGKG-002) 186158183-186362077 retained_intron
ENST00000480933 (DGKG-010) 186257764-186261959 retained_intron
ENST00000482566 (DGKG-005) 186279134-186281259 retained_intron
ENST00000490452 (DGKG-007) 186150165-186242637 retained_intron
ENSG00000234197 (ETV5-AS1)
ETV5 antisense RNA 1 		ENST00000453370 (ETV5-AS1-001) 186079170-186080947 antisense
ENSG00000244405 (ETV5)
ets variant 5 		ENST00000306376 (ETV5-001) 186046308-186109112 protein_coding
ENST00000413301 (ETV5-005) 186080070-186108929 protein_coding
ENST00000421809 (ETV5-007) 186080047-186108999 protein_coding
ENST00000422039 (ETV5-006) 186081124-186108550 protein_coding
ENST00000433149 (ETV5-011) 186048815-186065970 nonsense_mediated_decay
ENST00000434744 (ETV5-002) 186048252-186108675 protein_coding
ENST00000440773 (ETV5-003) 186080017-186110318 protein_coding
ENST00000472868 (ETV5-014) 186066005-186105942 processed_transcript
ENST00000475484 (ETV5-008) 186104926-186105490 retained_intron
ENST00000476890 (ETV5-004) 186095120-186109081 processed_transcript
ENST00000480706 (ETV5-012) 186048582-186064560 processed_transcript
ENST00000484223 (ETV5-009) 186064443-186079105 processed_transcript
ENST00000489830 (ETV5-010) 186064213-186079906 processed_transcript
ENST00000495808 (ETV5-013) 186105410-186105724 retained_intron
ENSG00000277118 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000619409 (Metazoa_SRP.1-410) 186076306-186076591 misc_RNA
CIL_0006RL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000013089-ENSMUSG00000022861 CGP 10090 16:22381309-22657221
GeneTranscriptPositionBiotype
ENSMUSG00000013089 (Etv5)
ets variant 5 		ENSMUST00000079601 (Etv5-001) 22381309-22439719 protein_coding
ENSMUST00000165506 (Etv5-004) 22401864-22439616 processed_transcript
ENSMUST00000168774 (Etv5-002) 22381316-22436514 protein_coding
ENSMUST00000170393 (Etv5-003) 22412924-22439570 protein_coding
ENSMUST00000170803 (Etv5-005) 22383579-22401829 nonsense_mediated_decay
ENSMUSG00000022861 (Dgkg)
diacylglycerol kinase, gamma 		ENSMUST00000023578 (Dgkg-004) 22469222-22657221 protein_coding
ENSMUST00000089925 (Dgkg-001) 22468461-22657173 protein_coding
ENSMUST00000137311 (Dgkg-003) 22548486-22657188 nonsense_mediated_decay
ENSMUST00000150553 (Dgkg-005) 22595628-22657028 processed_transcript
ENSMUSG00000084511 (Gm22481)
predicted gene, 22481 		ENSMUST00000122562 (Gm22481-201) 22595029-22595220 misc_RNA
ENSMUSG00000089663 (Gm15651)
predicted gene 15651 		ENSMUST00000159953 (Gm15651-001) 22548553-22551149 processed_transcript
ENSMUSG00000089874 (9230117E06Rik)
RIKEN cDNA 9230117E06 gene 		ENSMUST00000159309 (9230117E06Rik-001) 22511480-22517681 antisense
ENSMUSG00000098448 (Mir6362)
microRNA 6362 		ENSMUST00000184329 (Mir6362-201) 22605326-22605432 miRNA
ENSMUSG00000099071 (Mir8095)
microRNA 8095 		ENSMUST00000185103 (Mir8095-201) 22532056-22532184 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006RL_0001ENSG00000058866ENST00000265022ENST00000344484ENST00000382164ENST00000437018ENST00000447054ENST00000466466ENST00000472506ENST00000480809ENST00000480933ENST00000482566ENST00000490452ENSG00000234197ENST00000453370ENSG00000244405ENST00000306376ENST00000413301ENST00000421809ENST00000422039ENST00000433149ENST00000434744ENST00000440773ENST00000472868ENST00000475484ENST00000476890ENST00000480706ENST00000484223ENST00000489830ENST00000495808ENSG00000277118ENST00000619409CIL_0006RL_0002ENSMUSG00000013089ENSMUST00000079601ENSMUST00000165506ENSMUST00000168774ENSMUST00000170393ENSMUST00000170803ENSMUSG00000022861ENSMUST00000023578ENSMUST00000089925ENSMUST00000137311ENSMUST00000150553ENSMUSG00000084511ENSMUST00000122562ENSMUSG00000089663ENSMUST00000159953ENSMUSG00000089874ENSMUST00000159309ENSMUSG00000098448ENSMUST00000184329ENSMUSG00000099071ENSMUST00000185103
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006RL_0001ENSG00000058866ENST00000265022ENST00000344484ENST00000382164ENST00000472506ENST00000482566ENSG00000234197ENST00000453370ENSG00000244405ENST00000306376ENST00000421809ENST00000434744ENSG00000277118ENST00000619409CIL_0006RL_0002ENSMUSG00000013089ENSMUST00000079601ENSMUST00000168774ENSMUST00000170393ENSMUST00000170803ENSMUSG00000022861ENSMUST00000023578ENSMUST00000089925ENSMUST00000137311ENSMUST00000150553ENSMUSG00000084511ENSMUST00000122562ENSMUSG00000089663ENSMUST00000159953ENSMUSG00000089874ENSMUST00000159309ENSMUSG00000098448ENSMUST00000184329ENSMUSG00000099071ENSMUST00000185103
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000058866 ENST00000265022 N/A 1.405±0.00 N/A 4.104±2.50 N/A 0.295±0.16 4.221±0.00 0.476±0.30 0.367±0.00 0.690±0.00 N/A N/A 1.731±0.00 1.142±0.00
ENST00000344484 N/A N/A 0.296±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000382164 N/A N/A N/A 1.777±0.00 N/A N/A 1.176±0.00 N/A 1.349±0.00 N/A N/A N/A N/A N/A
ENST00000437018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472506 N/A N/A N/A N/A N/A N/A N/A 2.857±0.00 N/A N/A N/A N/A N/A N/A
ENST00000480809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480933 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482566 N/A N/A N/A N/A N/A N/A N/A 0.640±0.00 N/A N/A N/A N/A N/A N/A
ENST00000490452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000234197 ENST00000453370 0.076±0.00 0.149±0.00 0.710±0.00 0.327±0.00 1.129±0.00 N/A 0.053±0.00 0.712±0.00 N/A 1.404±1.29 N/A N/A 0.178±0.00 0.216±0.18
ENSG00000244405 ENST00000306376 4.079±0.00 3.508±0.00 N/A 6.005±0.87 2.930±0.00 1.117±0.79 2.056±0.00 0.571±0.00 1.031±0.00 4.782±0.73 4.250±0.00 1.253±0.55 11.035±2.92 6.393±1.54
ENST00000413301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421809 N/A N/A N/A N/A N/A 2.359±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434744 N/A N/A 0.452±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000277118 ENST00000619409 N/A 0.263±0.00 4.122±0.00 N/A N/A 2.398±0.00 0.372±0.25 N/A N/A 4.894±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000013089 ENSMUST00000079601 7.849±3.27 10.686±2.48 6.590±1.40 7.313±1.22 6.182±0.17 10.867±3.43 4.797±0.78 8.850±0.47 1.957±0.80 56.208±5.43 3.257±0.30 4.059±1.73 4.179±4.11 5.017±2.40
ENSMUST00000165506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168774 N/A 6.669±0.27 N/A N/A N/A 5.796±2.40 N/A N/A 0.618±0.45 N/A N/A 1.756±0.54 0.672±0.31 0.378±0.00
ENSMUST00000170393 N/A N/A N/A 38.845±0.00 N/A N/A N/A N/A N/A N/A N/A 6.572±0.00 2.503±1.19 6.730±0.00
ENSMUST00000170803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.298±0.00 N/A
ENSMUSG00000022861 ENSMUST00000023578 0.043±0.00 0.249±0.10 N/A 7.238±0.00 0.128±0.00 0.146±0.02 N/A N/A 0.015±0.00 N/A 0.065±0.05 0.134±0.09 0.042±0.00 N/A
ENSMUST00000089925 0.118±0.01 0.115±0.06 N/A 0.070±0.03 0.028±0.02 0.254±0.10 0.053±0.00 0.562±0.12 0.145±0.11 0.256±0.08 0.056±0.01 0.135±0.09 0.106±0.00 0.065±0.02
ENSMUST00000137311 0.049±0.01 0.097±0.02 N/A N/A 0.060±0.01 0.232±0.04 0.044±0.00 0.204±0.02 0.084±0.00 N/A N/A N/A N/A N/A
ENSMUST00000150553 N/A 0.193±0.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.095±0.02 0.005±0.00 N/A
ENSMUSG00000084511 ENSMUST00000122562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.283±0.00 N/A
ENSMUSG00000089663 ENSMUST00000159953 0.189±0.05 0.175±0.06 N/A 0.069±0.00 0.047±0.03 0.431±0.13 0.156±0.12 1.117±0.30 0.058±0.00 0.580±0.03 0.036±0.01 0.116±0.07 0.175±0.14 0.087±0.05
ENSMUSG00000089874 ENSMUST00000159309 0.191±0.00 N/A 0.218±0.11 0.038±0.00 0.243±0.15 N/A 0.109±0.03 0.187±0.05 N/A 3.264±1.41 N/A 0.171±0.05 0.021±0.01 0.075±0.00
ENSMUSG00000098448 ENSMUST00000184329 1477.060±0.00 N/A N/A N/A N/A N/A N/A 2477.700±0.00 N/A N/A N/A N/A N/A N/A
ENSMUSG00000099071 ENSMUST00000185103 N/A N/A N/A 4.305±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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