C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00073C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000187959-ENSG00000179604 CGP 9606 17:73248449-73312175
GeneTranscriptPositionBiotype
ENSG00000179604 (CDC42EP4)
CDC42 effector protein (Rho GTPase binding) 4
ENST00000335793 (CDC42EP4-001) 73283624-73312175 protein_coding
ENST00000439510 (CDC42EP4-003) 73283625-73311993 protein_coding
ENST00000578516 (CDC42EP4-005) 73311054-73312005 processed_transcript
ENST00000579611 (CDC42EP4-004) 73286282-73312001 protein_coding
ENST00000580315 (CDC42EP4-006) 73286119-73311408 protein_coding
ENST00000581014 (CDC42EP4-009) 73285178-73311997 protein_coding
ENST00000581045 (CDC42EP4-007) 73286518-73310198 processed_transcript
ENST00000582303 (CDC42EP4-008) 73306698-73309895 processed_transcript
CIL_00073C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018727-ENSMUSG00000041598 CGP 10090 11:113698172-113751881
GeneTranscriptPositionBiotype
ENSMUSG00000018727 (Cpsf4l)
cleavage and polyadenylation specific factor 4-like
ENSMUST00000018871 (Cpsf4l-001) 113698172-113710017 protein_coding
ENSMUST00000100248 (Cpsf4l-201) 113698172-113709526 protein_coding
ENSMUST00000106617 (Cpsf4l-003) 113698172-113708967 protein_coding
ENSMUST00000151396 (Cpsf4l-004) 113702712-113709524 retained_intron
ENSMUST00000173655 (Cpsf4l-002) 113698172-113709520 protein_coding
ENSMUSG00000041598 (Cdc42ep4)
CDC42 effector protein (Rho GTPase binding) 4
ENSMUST00000053536 (Cdc42ep4-001) 113726852-113751881 protein_coding
ENSMUST00000106616 (Cdc42ep4-002) 113726850-113751318 protein_coding
ENSMUST00000131488 (Cdc42ep4-004) 113728983-113739322 protein_coding
ENSMUST00000153453 (Cdc42ep4-003) 113729305-113751154 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00073C_0001ENSG00000179604ENST00000335793ENST00000439510ENST00000578516ENST00000579611ENST00000580315ENST00000581014ENST00000581045ENST00000582303CIL_00073C_0002ENSMUSG00000018727ENSMUST00000018871ENSMUST00000100248ENSMUST00000106617ENSMUST00000151396ENSMUST00000173655ENSMUSG00000041598ENSMUST00000053536ENSMUST00000106616ENSMUST00000131488ENSMUST00000153453
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00073C_0001ENSG00000179604ENST00000335793ENST00000439510ENST00000579611ENST00000580315CIL_00073C_0002ENSMUSG00000018727ENSMUST00000018871ENSMUST00000100248ENSMUST00000106617ENSMUST00000151396ENSMUST00000173655ENSMUSG00000041598ENSMUST00000053536ENSMUST00000106616
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000179604 ENST00000335793 43.545±0.00 16.873±0.00 N/A 10.685±8.90 9.265±7.69 13.215±11.31 8.084±6.15 5.778±3.91 2.866±2.00 10.153±8.71 5.262±0.00 35.574±21.37 21.003±0.91 11.923±0.00
ENST00000439510 34.887±0.00 13.384±0.00 N/A 12.924±11.25 17.413±0.00 15.901±0.00 N/A 9.822±0.00 2.886±0.60 4.565±3.87 1.037±0.00 4.063±0.74 7.070±1.41 5.979±4.35
ENST00000578516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579611 N/A N/A 5.056±0.00 N/A N/A N/A N/A N/A N/A N/A 1.741±0.00 N/A N/A N/A
ENST00000580315 N/A N/A N/A N/A N/A 3.978±0.00 N/A N/A 6.437±0.00 N/A N/A 5.570±0.00 N/A N/A
ENST00000581014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018727 ENSMUST00000018871 N/A N/A N/A N/A N/A N/A 0.071±0.00 0.622±0.00 N/A N/A 0.043±0.00 N/A 0.367±0.26 9.035±0.00
ENSMUST00000100248 N/A N/A 0.261±0.05 0.283±0.06 0.657±0.00 N/A 0.061±0.00 1.228±0.35 0.274±0.16 N/A 0.061±0.00 3.325±1.10 0.615±0.09 9.434±1.19
ENSMUST00000106617 N/A N/A N/A N/A 1.386±0.00 N/A N/A 1.575±0.50 0.219±0.12 N/A 0.059±0.00 N/A 0.205±0.00 N/A
ENSMUST00000151396 N/A N/A 0.585±0.01 1.182±0.09 N/A N/A 0.131±0.00 N/A 0.277±0.06 N/A 0.222±0.12 1.764±0.00 0.382±0.15 N/A
ENSMUST00000173655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.890±0.61 N/A 7.289±0.00
ENSMUSG00000041598 ENSMUST00000053536 29.145±5.72 87.339±13.85 8.767±0.69 17.039±11.53 23.203±4.85 21.075±3.65 4.314±0.95 7.118±0.57 8.917±1.79 40.509±10.82 1.661±0.54 23.241±7.34 17.791±2.18 6.222±0.22
ENSMUST00000106616 3.483±0.37 N/A 1.892±0.07 N/A 2.938±0.15 2.677±0.22 0.489±0.04 0.839±0.11 2.582±1.17 5.242±0.70 N/A 2.915±0.82 2.400±0.09 6.320±2.83
ENSMUST00000131488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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