C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: CDC42 effector protein (Rho GTPase binding) 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000580315 CDC42EP4-006 ENSG00000179604 9606 - 17:73286119-73311408 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverOvaryENST00000580315
Transcript ID Colon Liver Ovary
ENST00000580315 3.978±0.00 6.437±0.00 5.570±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R4 CIL_0007R4_0001 VISTA 17:72990906-73592358
CIL_0008QM CIL_0008QM_0001 VISTA 17:73240460-73843108
CIL_00073C CIL_00073C_0001 CGP 17:73248449-73312175
CIL_0003AC CIL_0003AC_0002 CGP 17:73283624-73644089

Gene Ontology

GO IDEvidence TypeGO Description
GO:0015629 IDA actin cytoskeleton
GO:0015630 IDA microtubule cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000131488 Cdc42ep4-004 protein_coding Mus_musculus 0 490
ENSMUST00000053536 Cdc42ep4-001 protein_coding Mus_musculus 0 490
ENSMUST00000106616 Cdc42ep4-002 protein_coding Mus_musculus 0 490
ENSMUST00000153453 Cdc42ep4-003 protein_coding Mus_musculus 0 326

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