C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00077O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185950-ENSG00000187498 CGP 9606 13:109752698-110307149
GeneTranscriptPositionBiotype
ENSG00000134871 (COL4A2)
collagen, type IV, alpha 2 		ENST00000360467 (COL4A2-001) 110307267-110513027 protein_coding
ENST00000400163 (COL4A2-004) 110305812-110424868 protein_coding
ENST00000462309 (COL4A2-006) 110430051-110430883 processed_transcript
ENST00000463084 (COL4A2-003) 110507444-110512133 processed_transcript
ENST00000478681 (COL4A2-007) 110462022-110462449 processed_transcript
ENST00000480609 (COL4A2-009) 110506468-110508330 retained_intron
ENST00000480771 (COL4A2-005) 110307267-110328549 processed_transcript
ENST00000483683 (COL4A2-008) 110477923-110485660 processed_transcript
ENST00000494852 (COL4A2-002) 110469217-110473594 processed_transcript
ENST00000617564 (COL4A2-010) 110458888-110459755 protein_coding
ENSG00000185950 (IRS2)
insulin receptor substrate 2 		ENST00000375856 (IRS2-001) 109752698-109786568 protein_coding
ENSG00000187498 (COL4A1)
collagen, type IV, alpha 1 		ENST00000375820 (COL4A1-001) 110148963-110307149 protein_coding
ENST00000467182 (COL4A1-004) 110161018-110163490 retained_intron
ENST00000474391 (COL4A1-003) 110161958-110163558 retained_intron
ENST00000543140 (COL4A1-005) 110190743-110307131 protein_coding
ENST00000615732 (COL4A1-006) 110206661-110298899 protein_coding
ENSG00000231428 (LINC00396)
long intergenic non-protein coding RNA 396 		ENST00000411690 (LINC00396-001) 110053285-110054952 lincRNA
ENSG00000265885 (RN7SL783P)
RNA, 7SL, cytoplasmic 783, pseudogene 		ENST00000577950 (RN7SL783P-201) 110097851-110098151 misc_RNA
ENSG00000274331 (RP11-403A3.1)
 ENST00000618896 (RP11-403A3.1-001) 109984858-109986565 lincRNA
ENSG00000275248 (RP11-40E6.2)
 ENST00000614629 (RP11-40E6.2-001) 109805317-109805868 lincRNA
ENSG00000275830 (RP11-403A3.3)
 ENST00000614099 (RP11-403A3.3-002) 109988097-110057331 lincRNA
ENST00000617298 (RP11-403A3.3-001) 110036197-110057286 lincRNA
ENSG00000276269 (RP11-403A3.2)
 ENST00000617383 (RP11-403A3.2-001) 110031101-110031567 lincRNA
ENSG00000279237 (RP11-212E4.1)
 ENST00000624845 (RP11-212E4.1-001) 110265251-110266113 TEC
ENSG00000279965 (RP11-472K17.3)
 ENST00000623716 (RP11-472K17.3-001) 110123208-110125234 TEC
CIL_00077O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038894-ENSMUSG00000031502 CGP 10090 8:10986980-11312826
GeneTranscriptPositionBiotype
ENSMUSG00000031502 (Col4a1)
collagen, type IV, alpha 1 		ENSMUST00000033898 (Col4a1-001) 11198423-11312826 protein_coding
ENSMUST00000130488 (Col4a1-002) 11212401-11216801 processed_transcript
ENSMUSG00000031503 (Col4a2)
collagen, type IV, alpha 2 		ENSMUST00000033899 (Col4a2-001) 11312805-11449287 protein_coding
ENSMUST00000145295 (Col4a2-002) 11404908-11421254 protein_coding
ENSMUST00000146219 (Col4a2-003) 11441109-11443702 processed_transcript
ENSMUSG00000038894 (Irs2)
insulin receptor substrate 2 		ENSMUST00000040514 (Irs2-201) 10986980-11008458 protein_coding
ENSMUSG00000085573 (Gm15418)
predicted gene 15418 		ENSMUST00000151014 (Gm15418-001) 11187755-11204503 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00077O_0001ENSG00000134871ENST00000360467ENST00000400163ENST00000462309ENST00000463084ENST00000478681ENST00000480609ENST00000480771ENST00000483683ENST00000494852ENST00000617564ENSG00000185950ENST00000375856ENSG00000187498ENST00000375820ENST00000467182ENST00000474391ENST00000543140ENST00000615732ENSG00000231428ENST00000411690ENSG00000265885ENST00000577950ENSG00000274331ENST00000618896ENSG00000275248ENST00000614629ENSG00000275830ENST00000614099ENST00000617298ENSG00000276269ENST00000617383ENSG00000279237ENST00000624845ENSG00000279965ENST00000623716CIL_00077O_0002ENSMUSG00000031502ENSMUST00000033898ENSMUST00000130488ENSMUSG00000031503ENSMUST00000033899ENSMUST00000145295ENSMUST00000146219ENSMUSG00000038894ENSMUST00000040514ENSMUSG00000085573ENSMUST00000151014
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00077O_0001ENSG00000134871ENST00000360467ENST00000400163ENSG00000185950ENST00000375856ENSG00000187498ENST00000375820ENST00000543140ENSG00000231428ENST00000411690ENSG00000265885ENST00000577950ENSG00000274331ENST00000618896ENSG00000275248ENST00000614629ENSG00000275830ENST00000614099ENST00000617298ENSG00000276269ENST00000617383ENSG00000279237ENST00000624845ENSG00000279965ENST00000623716CIL_00077O_0002ENSMUSG00000031502ENSMUST00000033898ENSMUSG00000031503ENSMUST00000033899ENSMUSG00000038894ENSMUST00000040514ENSMUSG00000085573ENSMUST00000151014
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134871 ENST00000360467 265.315±0.00 98.245±0.00 5.994±0.00 4.242±3.82 113.576±84.65 86.251±74.57 22.897±19.62 34.905±33.63 17.026±11.81 116.904±106.65 6.945±3.58 50.465±30.16 638.948±245.38 42.160±32.84
ENST00000400163 N/A N/A N/A 2.723±0.00 N/A N/A 15.240±0.00 N/A 104.901±0.00 33.572±0.00 N/A N/A N/A N/A
ENST00000462309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185950 ENST00000375856 27.605±0.00 1.299±0.00 0.948±0.00 10.820±7.99 11.513±6.81 6.676±6.15 7.831±7.38 3.088±0.41 3.513±2.41 2.664±2.07 9.997±8.12 5.145±2.11 10.989±3.80 2.980±2.02
ENSG00000187498 ENST00000375820 152.829±0.00 53.677±0.00 5.161±0.00 2.110±1.73 80.201±52.63 64.973±55.96 15.291±10.79 10.128±7.53 14.050±9.55 115.204±105.25 9.806±5.04 37.284±21.23 471.781±170.33 19.862±16.53
ENST00000467182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543140 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.657±0.00 N/A N/A N/A N/A
ENST00000615732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000231428 ENST00000411690 N/A N/A N/A 0.160±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.140±0.00
ENSG00000265885 ENST00000577950 0.058±0.00 N/A N/A N/A N/A N/A 0.058±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000274331 ENST00000618896 N/A N/A N/A 0.143±0.00 0.035±0.00 0.033±0.00 N/A 0.006±0.00 N/A N/A N/A N/A 0.070±0.01 0.046±0.00
ENSG00000275248 ENST00000614629 N/A N/A N/A N/A 0.125±0.00 N/A N/A N/A N/A N/A N/A 0.050±0.00 N/A 0.073±0.03
ENSG00000275830 ENST00000614099 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.406±0.00 N/A N/A 0.062±0.00 N/A
ENST00000617298 N/A 0.113±0.00 N/A 1.757±0.00 0.048±0.00 0.723±0.00 0.241±0.00 0.321±0.00 7.060±0.00 0.413±0.28 0.198±0.00 0.196±0.00 1.511±1.11 0.273±0.20
ENSG00000276269 ENST00000617383 N/A N/A N/A 0.715±0.00 N/A 0.188±0.00 N/A N/A 0.359±0.00 0.637±0.00 0.256±0.00 0.101±0.05 0.244±0.10 N/A
ENSG00000279237 ENST00000624845 0.272±0.00 N/A 0.283±0.00 N/A 0.370±0.26 N/A 0.262±0.18 N/A 1.506±0.00 0.811±0.00 0.099±0.00 0.080±0.01 0.100±0.05 0.020±0.00
ENSG00000279965 ENST00000623716 0.023±0.00 N/A N/A 0.079±0.00 0.026±0.02 N/A 0.038±0.00 0.127±0.00 0.057±0.00 0.464±0.44 N/A 0.145±0.11 0.066±0.04 0.013±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031502 ENSMUST00000033898 91.873±27.58 83.111±6.80 97.571±20.14 15.413±6.13 145.601±15.06 63.130±1.86 61.149±5.05 39.153±17.68 6.848±2.49 99.739±40.18 16.273±4.27 135.802±24.96 239.179±149.54 4.078±1.18
ENSMUST00000130488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031503 ENSMUST00000033899 68.704±16.80 37.082±3.19 74.399±14.13 19.088±7.46 43.910±6.59 20.064±1.96 24.006±4.81 16.417±1.00 2.776±1.71 107.303±21.29 13.674±2.92 45.981±29.29 213.697±111.35 1.952±0.30
ENSMUST00000145295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038894 ENSMUST00000040514 0.537±0.04 6.686±2.14 N/A 1.933±0.15 5.621±3.55 7.024±3.17 1.502±0.28 2.761±1.70 1.319±0.71 6.143±1.35 2.245±0.17 5.717±1.92 11.399±6.65 0.676±0.45
ENSMUSG00000085573 ENSMUST00000151014 0.589±0.07 0.374±0.00 0.449±0.16 0.236±0.00 0.419±0.24 0.260±0.15 0.216±0.08 0.144±0.03 0.042±0.03 0.335±0.06 0.081±0.02 0.479±0.20 0.564±0.48 0.058±0.00

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