C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ribosomal protein S3A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000512690 RPS3A-015 ENSG00000145425 9606 + 4:151099639-151104637 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000512690
Transcript ID Bladder
ENST00000512690 30.990±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LR CIL_0006LR_0002 CGP 4:150581922-151104652

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0022627 IEA cytosolic small ribosomal subunit
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029722 Rps3a1-001 protein_coding Mus_musculus 0 1003
ENSMUST00000074680 Rps3a3-001 processed_pseudogene Mus_musculus 0 952
ENSMUST00000074245 Rps3a2-001 processed_pseudogene Mus_musculus 0 933
ENSMUST00000119822 Gm13408-001 processed_pseudogene Mus_musculus 0 909
ENSMUST00000121639 Gm13508-001 processed_pseudogene Mus_musculus 0 673
ENSMUST00000186012 RP24-117M7.2-001 processed_pseudogene Mus_musculus 0 375

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