C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007B4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000214511-ENSG00000110911 CGP 9606 12:50953922-51028566
GeneTranscriptPositionBiotype
ENSG00000110911 (SLC11A2)
solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 		ENST00000262051 (SLC11A2-006) 50979535-51026359 protein_coding
ENST00000262052 (SLC11A2-002) 50985992-51026384 protein_coding
ENST00000394904 (SLC11A2-201) 50985992-51028275 protein_coding
ENST00000541174 (SLC11A2-005) 50987946-51026141 protein_coding
ENST00000545993 (SLC11A2-008) 50988173-51009249 protein_coding
ENST00000546488 (SLC11A2-012) 50996941-51026384 protein_coding
ENST00000546636 (SLC11A2-004) 50979820-51026368 nonsense_mediated_decay
ENST00000546743 (SLC11A2-003) 50988320-51026400 protein_coding
ENST00000547198 (SLC11A2-007) 50981009-51026338 protein_coding
ENST00000547510 (SLC11A2-015) 50996871-51026393 nonsense_mediated_decay
ENST00000547579 (SLC11A2-010) 50996961-51026391 protein_coding
ENST00000547688 (SLC11A2-001) 50987939-51028566 protein_coding
ENST00000547732 (SLC11A2-014) 51000318-51026363 protein_coding
ENST00000548150 (SLC11A2-025) 51010720-51024843 protein_coding
ENST00000548193 (SLC11A2-020) 51000402-51026384 protein_coding
ENST00000548554 (SLC11A2-023) 50990584-50991667 retained_intron
ENST00000549110 (SLC11A2-017) 51000350-51005848 protein_coding
ENST00000549193 (SLC11A2-016) 51005322-51009168 processed_transcript
ENST00000549625 (SLC11A2-018) 51005319-51026384 nonsense_mediated_decay
ENST00000550061 (SLC11A2-021) 50995684-50999565 retained_intron
ENST00000550329 (SLC11A2-019) 51008145-51026379 retained_intron
ENST00000550714 (SLC11A2-011) 50999368-51026384 protein_coding
ENST00000550782 (SLC11A2-009) 50985993-50995092 retained_intron
ENST00000550995 (SLC11A2-013) 51005404-51026365 processed_transcript
ENST00000551215 (SLC11A2-024) 50979401-50992209 nonsense_mediated_decay
ENST00000551231 (SLC11A2-022) 50991599-50993144 retained_intron
ENSG00000214511 (HIGD1C)
HIG1 hypoxia inducible domain family, member 1C 		ENST00000398455 (HIGD1C-001) 50953922-50970506 protein_coding
ENSG00000272028 (U6)
U6 spliceosomal RNA 		ENST00000607561 (U6.1-233) 51014134-51014241 snRNA
ENSG00000274797 (RP11-407N8.5)
 ENST00000618726 (RP11-407N8.5-001) 50953924-50954356 antisense

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0007B4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000093550-ENSMUSG00000023030 CGP 10090 15:100364542-100425072
GeneTranscriptPositionBiotype
ENSMUSG00000023030 (Slc11a2)
solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 		ENSMUST00000023774 (Slc11a2-001) 100387898-100423055 protein_coding
ENSMUST00000123461 (Slc11a2-005) 100406306-100425072 protein_coding
ENSMUST00000124324 (Slc11a2-009) 100397594-100403243 protein_coding
ENSMUST00000136168 (Slc11a2-004) 100408140-100422969 nonsense_mediated_decay
ENSMUST00000138843 (Slc11a2-002) 100392563-100423002 protein_coding
ENSMUST00000140535 (Slc11a2-008) 100397782-100403422 retained_intron
ENSMUST00000154331 (Slc11a2-003) 100409269-100424214 protein_coding
ENSMUST00000154676 (Slc11a2-006) 100410114-100424092 protein_coding
ENSMUSG00000093550 (Higd1c)
HIG1 domain family, member 1C 		ENSMUST00000175683 (Higd1c-002) 100364542-100383859 protein_coding
ENSMUST00000177211 (Higd1c-001) 100364545-100383964 protein_coding
ENSMUSG00000093789 (Mettl7a2Higd1c)
Mettl7a2-Higd1c readthrough transcript 		ENSMUST00000075675 (Mettl7a2Higd1c-001) 100353149-100383964 protein_coding
ENSMUST00000175929 (Mettl7a2Higd1c-002) 100353166-100383837 nonsense_mediated_decay

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007B4_0001ENSG00000110911ENST00000262051ENST00000262052ENST00000545993ENST00000546636ENST00000546743ENST00000547198ENST00000549110ENST00000550782ENSG00000214511ENST00000398455ENSG00000272028ENST00000607561ENSG00000274797ENST00000618726CIL_0007B4_0002ENSMUSG00000023030ENSMUST00000023774ENSMUST00000138843ENSMUSG00000093550ENSMUST00000175683ENSMUST00000177211ENSMUSG00000093789ENSMUST00000075675ENSMUST00000175929
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000110911 ENST00000262051 1.572±0.00 3.426±0.00 N/A N/A 2.392±0.00 1.650±0.00 1.226±0.00 2.278±1.18 0.779±0.00 2.400±0.00 1.354±0.00 3.520±0.75 2.797±0.59 2.040±0.34
ENST00000262052 N/A N/A N/A 12.629±0.00 N/A N/A 0.533±0.00 N/A 2.934±0.00 3.830±0.00 0.860±0.00 2.389±1.01 3.091±1.50 N/A
ENST00000394904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545993 N/A N/A N/A N/A 3.470±0.00 N/A N/A 3.009±0.00 N/A N/A N/A 3.361±0.00 N/A N/A
ENST00000546488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546636 N/A N/A N/A N/A N/A 2.418±0.00 1.464±0.00 N/A N/A N/A 1.475±0.00 N/A 3.638±0.00 N/A
ENST00000546743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.780±0.00
ENST00000547198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.343±0.00
ENST00000547510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.717±0.00 N/A N/A N/A
ENST00000549193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550782 1.403±0.00 2.041±0.00 N/A 3.837±0.00 N/A N/A N/A N/A N/A 2.616±0.00 N/A 1.113±0.00 N/A 2.298±0.00
ENST00000550995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000214511 ENST00000398455 N/A N/A N/A 0.457±0.00 N/A N/A N/A 0.884±0.76 N/A N/A N/A N/A N/A 0.131±0.04
ENSG00000272028 ENST00000607561 0.391±0.00 N/A N/A 0.200±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000274797 ENST00000618726 0.026±0.00 N/A N/A N/A N/A 0.089±0.00 0.024±0.00 0.361±0.22 N/A 0.102±0.00 N/A 0.161±0.00 N/A 0.046±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023030 ENSMUST00000023774 12.105±2.63 26.801±5.05 7.673±1.16 7.890±0.55 10.855±3.12 14.789±2.40 7.354±0.42 19.202±0.78 12.401±10.12 11.567±0.31 4.477±1.43 19.461±7.97 6.994±3.05 3.986±1.93
ENSMUST00000123461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138843 5.268±0.34 8.573±1.39 2.156±0.22 5.034±2.54 2.992±0.38 4.080±0.29 3.607±0.37 15.819±4.10 8.423±2.16 6.278±0.61 4.758±0.69 4.383±1.56 7.645±3.75 6.030±2.76
ENSMUST00000140535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000093550 ENSMUST00000175683 N/A 0.377±0.09 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177211 0.081±0.00 0.190±0.02 N/A 0.072±0.00 N/A N/A N/A N/A 0.058±0.03 N/A N/A N/A 0.140±0.00 N/A
ENSMUSG00000093789 ENSMUST00000075675 N/A N/A N/A 0.122±0.00 N/A N/A N/A N/A 0.016±0.00 0.181±0.00 N/A N/A 0.059±0.00 N/A
ENSMUST00000175929 0.047±0.00 0.108±0.03 0.007±0.00 0.454±0.00 N/A N/A N/A N/A 0.047±0.03 0.208±0.08 0.067±0.02 0.289±0.06 0.113±0.02 0.148±0.00

Loading