C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007EE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119335-ENSG00000160447 CGP 9606 9:128683424-128720918
GeneTranscriptPositionBiotype
ENSG00000119335 (SET)
SET nuclear proto-oncogene 		ENST00000322030 (SET-002) 128689226-128696388 protein_coding
ENST00000372686 (SET-010) 128689989-128694894 protein_coding
ENST00000372688 (SET-201) 128689987-128694664 protein_coding
ENST00000372692 (SET-001) 128683655-128696400 protein_coding
ENST00000409104 (SET-003) 128685083-128694734 protein_coding
ENST00000454747 (SET-009) 128683424-128683991 protein_coding
ENST00000466009 (SET-005) 128690250-128691918 processed_transcript
ENST00000477806 (SET-008) 128690281-128693998 processed_transcript
ENST00000480217 (SET-004) 128690285-128692916 processed_transcript
ENST00000480536 (SET-012) 128691078-128692756 retained_intron
ENST00000485056 (SET-011) 128692351-128692935 retained_intron
ENSG00000160446 (ZDHHC12)
zinc finger, DHHC-type containing 12 		ENST00000372663 (ZDHHC12-004) 128720869-128724106 protein_coding
ENST00000372667 (ZDHHC12-003) 128720870-128724123 protein_coding
ENST00000406904 (ZDHHC12-001) 128721668-128724109 protein_coding
ENST00000452105 (ZDHHC12-002) 128721397-128724121 protein_coding
ENST00000467312 (ZDHHC12-006) 128720880-128724127 processed_transcript
ENSG00000160447 (PKN3)
protein kinase N3 		ENST00000291906 (PKN3-001) 128702523-128720918 protein_coding
ENST00000483521 (PKN3-002) 128713117-128720740 processed_transcript
ENST00000485301 (PKN3-003) 128714606-128720010 processed_transcript
ENSG00000264438 (RN7SL560P)
RNA, 7SL, cytoplasmic 560, pseudogene 		ENST00000577943 (RN7SL560P-201) 128709780-128710043 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_0007EE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000054766-ENSMUSG00000026785 CGP 10090 2:30057378-30091022
GeneTranscriptPositionBiotype
ENSMUSG00000015335 (Zdhhc12)
zinc finger, DHHC domain containing 12 		ENSMUST00000081838 (Zdhhc12-002) 30090951-30093635 protein_coding
ENSMUST00000102865 (Zdhhc12-001) 30090944-30093648 protein_coding
ENSMUST00000137001 (Zdhhc12-004) 30091331-30093616 retained_intron
ENSMUST00000148717 (Zdhhc12-003) 30090944-30093019 processed_transcript
ENSMUSG00000026785 (Pkn3)
protein kinase N3 		ENSMUST00000045246 (Pkn3-001) 30078584-30091019 protein_coding
ENSMUST00000125346 (Pkn3-005) 30077684-30081125 protein_coding
ENSMUST00000126838 (Pkn3-007) 30080851-30083221 retained_intron
ENSMUST00000134591 (Pkn3-003) 30078698-30085547 retained_intron
ENSMUST00000137240 (Pkn3-002) 30078754-30091022 retained_intron
ENSMUST00000148650 (Pkn3-004) 30077743-30091013 retained_intron
ENSMUST00000150770 (Pkn3-006) 30078213-30079982 protein_coding
ENSMUST00000156197 (Pkn3-008) 30084653-30087036 retained_intron
ENSMUSG00000054766 (Set)
SET nuclear oncogene 		ENSMUST00000067996 (Set-002) 30066456-30072577 protein_coding
ENSMUST00000102866 (Set-001) 30061853-30072577 protein_coding
ENSMUST00000125824 (Set-005) 30062601-30071118 processed_transcript
ENSMUST00000134364 (Set-004) 30057378-30070303 protein_coding
ENSMUST00000137291 (Set-006) 30067193-30069630 processed_transcript
ENSMUST00000147590 (Set-007) 30070170-30071429 processed_transcript
ENSMUST00000149578 (Set-003) 30061754-30069557 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007EE_0001ENSG00000119335ENST00000322030ENST00000372686ENST00000372688ENST00000372692ENST00000409104ENST00000454747ENST00000466009ENST00000477806ENST00000480217ENST00000480536ENST00000485056ENSG00000160446ENST00000372663ENST00000372667ENST00000406904ENST00000452105ENST00000467312ENSG00000160447ENST00000291906ENST00000483521ENST00000485301ENSG00000264438ENST00000577943CIL_0007EE_0002ENSMUSG00000015335ENSMUST00000081838ENSMUST00000102865ENSMUST00000137001ENSMUST00000148717ENSMUSG00000026785ENSMUST00000045246ENSMUST00000125346ENSMUST00000126838ENSMUST00000134591ENSMUST00000137240ENSMUST00000148650ENSMUST00000150770ENSMUST00000156197ENSMUSG00000054766ENSMUST00000067996ENSMUST00000102866ENSMUST00000125824ENSMUST00000134364ENSMUST00000137291ENSMUST00000147590ENSMUST00000149578
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007EE_0001ENSG00000119335ENST00000322030ENST00000372686ENST00000372688ENST00000372692ENSG00000160446ENST00000372663ENST00000372667ENST00000467312ENSG00000160447ENST00000291906ENST00000483521ENST00000485301ENSG00000264438ENST00000577943CIL_0007EE_0002ENSMUSG00000015335ENSMUST00000081838ENSMUST00000102865ENSMUST00000137001ENSMUST00000148717ENSMUSG00000026785ENSMUST00000045246ENSMUST00000134591ENSMUST00000137240ENSMUST00000148650ENSMUSG00000054766ENSMUST00000067996ENSMUST00000102866ENSMUST00000125824ENSMUST00000134364ENSMUST00000147590ENSMUST00000149578
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119335 ENST00000322030 64.501±0.00 71.225±0.00 14.332±0.00 36.094±8.38 32.599±11.67 52.535±32.53 24.100±10.98 33.650±19.34 29.912±6.38 37.839±21.68 35.516±28.97 83.492±49.30 63.873±40.40 61.917±4.20
ENST00000372686 N/A N/A N/A 20.296±0.00 N/A N/A 7.665±0.00 10.913±0.00 N/A N/A N/A N/A N/A N/A
ENST00000372688 N/A N/A N/A 42.008±0.00 35.764±0.00 13.353±0.00 N/A N/A 26.424±0.00 22.712±0.00 N/A 94.676±0.00 86.929±0.00 48.302±0.00
ENST00000372692 N/A N/A N/A N/A 5.791±0.00 5.057±0.00 N/A N/A N/A 6.670±0.00 N/A 13.520±5.61 11.000±1.11 N/A
ENST00000409104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000160446 ENST00000372663 10.092±0.00 8.463±0.00 0.749±0.00 1.647±0.70 5.435±4.46 6.602±1.99 1.889±1.51 15.893±0.00 7.070±6.60 5.150±2.24 3.876±0.00 10.033±5.51 32.948±10.74 6.860±1.18
ENST00000372667 N/A 8.548±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.028±0.00
ENST00000406904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467312 N/A N/A 0.185±0.00 N/A N/A 0.495±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000160447 ENST00000291906 12.017±0.00 7.168±0.00 0.119±0.00 0.721±0.48 4.900±4.52 3.290±0.00 1.660±1.42 2.981±0.00 2.370±0.00 4.738±0.00 0.681±0.00 5.447±3.81 3.823±1.69 2.521±0.80
ENST00000483521 N/A N/A N/A N/A N/A N/A N/A N/A 0.163±0.00 N/A N/A N/A N/A N/A
ENST00000485301 N/A N/A N/A N/A N/A N/A N/A N/A 0.235±0.00 2.785±1.73 N/A 14.309±13.41 3.975±0.00 4.069±0.00
ENSG00000264438 ENST00000577943 0.802±0.00 1.081±0.00 N/A 0.346±0.00 1.319±0.00 0.293±0.00 N/A 0.108±0.00 0.571±0.00 0.108±0.00 0.174±0.00 1.351±0.92 0.271±0.00 0.431±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015335 ENSMUST00000081838 N/A N/A N/A N/A N/A 5.804±0.00 N/A N/A N/A N/A N/A 8.450±0.00 6.147±2.05 N/A
ENSMUST00000102865 9.825±2.03 24.677±1.79 11.665±2.40 5.303±3.02 6.562±0.61 17.317±3.87 3.502±0.49 13.727±1.72 15.423±2.76 11.642±1.32 2.155±0.75 15.672±6.17 20.407±8.16 34.356±14.65
ENSMUST00000137001 12.847±1.25 29.123±3.36 9.622±2.00 6.459±1.95 15.727±3.38 20.387±2.79 4.451±0.00 13.476±3.81 9.509±2.19 15.436±1.56 N/A 27.218±2.31 11.290±2.26 35.955±2.63
ENSMUST00000148717 N/A N/A N/A N/A 4.812±1.58 5.123±0.00 N/A N/A 3.794±0.00 N/A N/A 6.056±1.21 N/A N/A
ENSMUSG00000026785 ENSMUST00000045246 N/A N/A 4.071±0.68 0.616±0.00 2.408±0.00 N/A 1.901±0.25 N/A N/A 4.107±0.70 0.850±0.24 2.652±0.00 2.283±0.16 N/A
ENSMUST00000125346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.829±0.00 N/A N/A N/A
ENSMUST00000137240 4.342±1.56 N/A N/A N/A 3.426±1.22 N/A 2.444±0.48 1.285±0.00 N/A 5.519±1.78 1.432±0.45 3.548±1.64 N/A N/A
ENSMUST00000148650 2.826±0.38 N/A 3.438±0.70 1.174±0.46 0.935±0.00 4.737±0.73 1.645±0.00 N/A 2.199±0.22 5.857±1.27 0.747±0.00 4.525±0.82 1.842±0.34 N/A
ENSMUST00000150770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000054766 ENSMUST00000067996 23.118±13.10 17.712±4.39 34.651±1.44 54.742±24.91 22.022±16.12 30.532±5.93 13.830±0.46 22.962±2.52 36.112±24.50 32.641±5.20 18.780±0.71 66.203±30.48 35.234±19.96 13.596±4.95
ENSMUST00000102866 7.013±1.41 21.262±4.18 N/A N/A 10.778±3.69 N/A N/A 2.643±0.25 7.883±7.07 N/A N/A 15.307±0.00 N/A N/A
ENSMUST00000125824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 70.281±0.00
ENSMUST00000134364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 78.503±59.75 N/A
ENSMUST00000137291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147590 N/A N/A 28.078±1.92 66.654±0.00 N/A N/A N/A N/A 80.816±40.96 N/A N/A 30.711±0.76 60.844±31.49 11.672±0.52
ENSMUST00000149578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 160.634±0.00 567.501±431.51 N/A

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