C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET nuclear proto-oncogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372686 SET-010 ENSG00000119335 9606 + 9:128689989-128694894 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyENST00000372686
Transcript ID Brain Heart Kidney
ENST00000372686 20.296±0.00 7.665±0.00 10.913±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LV CIL_0002LV_0002 CGP 9:128633661-128696400
CIL_0007EE CIL_0007EE_0001 CGP 9:128683424-128720918

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006334 IEA nucleosome assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067996 Set-002 protein_coding Mus_musculus 0 1210
ENSMUST00000102866 Set-001 protein_coding Mus_musculus 0 1210
ENSMUST00000125824 Set-005 processed_transcript Mus_musculus 0 1188
ENSMUST00000183511 Gm9531-001 transcribed_processed_pseudogene Mus_musculus 0 1018
ENSMUST00000121098 Gm12642-001 processed_pseudogene Mus_musculus 0 970
ENSMUST00000118921 Gm11877-001 processed_pseudogene Mus_musculus 0 952
ENSMUST00000134364 Set-004 protein_coding Mus_musculus 0 874
ENSMUST00000120309 Gm14746-001 processed_pseudogene Mus_musculus 0 747
ENSMUST00000137291 Set-006 processed_transcript Mus_musculus 0 702
ENSMUST00000120258 Gm16420-001 processed_pseudogene Mus_musculus 0 652
ENSMUST00000190284 RP24-492P7.1-001 processed_pseudogene Mus_musculus 0 652
ENSMUST00000149578 Set-003 protein_coding Mus_musculus 0 590
ENSMUST00000121657 Gm12752-001 processed_pseudogene Mus_musculus 0 527
ENSMUST00000147590 Set-007 processed_transcript Mus_musculus 0 510
ENSMUST00000184573 Gm9531-006 retained_intron Mus_musculus 0 287
ENSMUST00000055820 Gm9531-002 processed_transcript Mus_musculus 0 285

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