C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET nuclear proto-oncogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000322030 SET-002 ENSG00000119335 9606 + 9:128689226-128696388 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000322030
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000322030 64.501±0.00 71.225±0.00 14.332±0.00 36.094±8.38 32.599±11.67 52.535±32.53 24.100±10.98 33.650±19.34 29.912±6.38 37.839±21.68 35.516±28.97 83.492±49.30 63.873±40.40 61.917±4.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LV CIL_0002LV_0002 CGP 9:128633661-128696400
CIL_0007EE CIL_0007EE_0001 CGP 9:128683424-128720918

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006334 IEA nucleosome assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067996 Set-002 protein_coding Mus_musculus 0 2342
ENSMUST00000102866 Set-001 protein_coding Mus_musculus 0 1971
ENSMUST00000125824 Set-005 processed_transcript Mus_musculus 0 1192
ENSMUST00000183511 Gm9531-001 transcribed_processed_pseudogene Mus_musculus 0 1020
ENSMUST00000121098 Gm12642-001 processed_pseudogene Mus_musculus 0 972
ENSMUST00000118921 Gm11877-001 processed_pseudogene Mus_musculus 0 953
ENSMUST00000134364 Set-004 protein_coding Mus_musculus 0 876
ENSMUST00000147590 Set-007 processed_transcript Mus_musculus 0 771
ENSMUST00000120309 Gm14746-001 processed_pseudogene Mus_musculus 0 765
ENSMUST00000137291 Set-006 processed_transcript Mus_musculus 0 704
ENSMUST00000120258 Gm16420-001 processed_pseudogene Mus_musculus 0 680
ENSMUST00000190284 RP24-492P7.1-001 processed_pseudogene Mus_musculus 0 652
ENSMUST00000149578 Set-003 protein_coding Mus_musculus 0 592
ENSMUST00000121657 Gm12752-001 processed_pseudogene Mus_musculus 0 529
ENSMUST00000184573 Gm9531-006 retained_intron Mus_musculus 0 287
ENSMUST00000055820 Gm9531-002 processed_transcript Mus_musculus 0 285

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