C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007IB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148606-ENSG00000138326 CGP 9606 10:77969251-78056812
GeneTranscriptPositionBiotype
ENSG00000138326 (RPS24)
ribosomal protein S24 		ENST00000360830 (RPS24-003) 78033883-78040697 protein_coding
ENST00000372360 (RPS24-001) 78033865-78040697 protein_coding
ENST00000435275 (RPS24-201) 78033760-78040713 protein_coding
ENST00000440692 (RPS24-202) 78033760-78056812 protein_coding
ENST00000464716 (RPS24-007) 78033874-78037472 processed_transcript
ENST00000465692 (RPS24-008) 78035352-78054676 processed_transcript
ENST00000466129 (RPS24-005) 78033886-78036086 retained_intron
ENST00000475468 (RPS24-004) 78033904-78035654 processed_transcript
ENST00000476545 (RPS24-009) 78033878-78054931 processed_transcript
ENST00000478655 (RPS24-006) 78033863-78037602 retained_intron
ENST00000480662 (RPS24-012) 78039598-78040697 retained_intron
ENST00000482069 (RPS24-010) 78033917-78040696 processed_transcript
ENST00000485708 (RPS24-002) 78033844-78040670 processed_transcript
ENST00000613865 (RPS24-203) 78033760-78037335 protein_coding
ENSG00000148606 (POLR3A)
polymerase (RNA) III (DNA directed) polypeptide A, 155kDa 		ENST00000372371 (POLR3A-002) 77975149-78029545 protein_coding
ENST00000472014 (POLR3A-005) 77991109-78009667 processed_transcript
ENST00000473588 (POLR3A-004) 78002197-78019252 nonsense_mediated_decay
ENST00000484760 (POLR3A-003) 78013086-78020173 processed_transcript
ENST00000616246 (POLR3A-201) 77969251-77985320 protein_coding
CIL_0007IB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025280-ENSMUSG00000025290 CGP 10090 14:24448694-24496146
GeneTranscriptPositionBiotype
ENSMUSG00000025280 (Polr3a)
polymerase (RNA) III (DNA directed) polypeptide A 		ENSMUST00000026322 (Polr3a-201) 24448694-24487046 protein_coding
ENSMUSG00000025290 (Rps24)
ribosomal protein S24 		ENSMUST00000112384 (Rps24-201) 24490681-24495432 protein_coding
ENSMUST00000169826 (Rps24-202) 24490681-24496146 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007IB_0001ENSG00000138326ENST00000360830ENST00000372360ENST00000435275ENST00000440692ENST00000464716ENST00000465692ENST00000466129ENST00000475468ENST00000476545ENST00000478655ENST00000480662ENST00000482069ENST00000485708ENST00000613865ENSG00000148606ENST00000372371ENST00000472014ENST00000473588ENST00000484760ENST00000616246CIL_0007IB_0002ENSMUSG00000025280ENSMUST00000026322ENSMUSG00000025290ENSMUST00000112384ENSMUST00000169826
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007IB_0001ENSG00000138326ENST00000360830ENST00000372360ENST00000435275ENST00000464716ENST00000485708ENSG00000148606ENST00000372371ENST00000484760CIL_0007IB_0002ENSMUSG00000025280ENSMUST00000026322ENSMUSG00000025290ENSMUST00000112384ENSMUST00000169826
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138326 ENST00000360830 420.235±0.00 511.409±0.00 13.050±0.00 148.085±32.12 272.893±86.57 293.323±234.77 77.663±60.14 128.050±58.52 143.776±34.22 398.325±309.37 69.650±49.76 1156.288±899.87 723.173±67.90 410.152±58.20
ENST00000372360 136.060±0.00 158.003±0.00 N/A N/A 82.014±0.00 N/A N/A N/A 84.507±0.00 31.788±0.00 N/A 579.228±476.46 147.457±0.00 122.597±0.00
ENST00000435275 N/A N/A 17.368±0.00 N/A 114.995±0.00 116.266±70.41 N/A 86.855±71.10 49.279±29.28 100.032±76.50 92.591±0.00 161.920±135.21 140.690±42.43 90.992±0.00
ENST00000440692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464716 N/A N/A 30.166±0.00 N/A N/A 72.328±0.00 15.229±0.00 43.677±0.00 65.094±0.00 33.518±0.00 N/A 96.356±0.00 N/A N/A
ENST00000465692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485708 N/A N/A N/A 50.261±7.14 N/A 100.626±0.00 80.339±49.22 N/A 46.402±0.00 N/A 368.269±283.32 N/A N/A N/A
ENST00000613865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000148606 ENST00000372371 1.920±0.00 2.180±0.00 0.415±0.00 2.745±1.05 1.620±0.25 1.049±0.64 1.692±0.00 1.145±0.00 1.182±0.02 N/A 2.813±0.00 3.131±0.56 3.640±0.89 4.722±0.12
ENST00000472014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484760 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.187±0.00 N/A N/A N/A N/A
ENST00000616246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025280 ENSMUST00000026322 3.336±1.27 1.061±0.26 3.987±0.12 4.257±2.06 1.885±0.40 2.001±0.48 1.834±0.30 3.174±0.45 2.020±0.96 2.468±0.34 1.556±0.37 3.684±1.54 5.197±1.29 2.687±0.36
ENSMUSG00000025290 ENSMUST00000112384 459.793±154.01 35.372±11.87 1695.065±142.63 613.710±234.38 535.799±188.91 396.797±67.67 342.438±11.50 365.775±20.21 842.138±768.63 325.305±10.75 172.536±64.01 551.808±549.99 958.098±471.83 606.300±49.24
ENSMUST00000169826 N/A N/A N/A 87.474±0.00 N/A N/A N/A N/A 102.038±80.78 N/A N/A 203.760±142.08 284.783±183.60 224.936±0.00

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