C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000435275 RPS24-201 ENSG00000138326 9606 + 10:78033760-78040713 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000435275
Transcript ID Bladder Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000435275 17.368±0.00 114.995±0.00 116.266±70.41 86.855±71.10 49.279±29.28 100.032±76.50 92.591±0.00 161.920±135.21 140.690±42.43 90.992±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A5 CIL_0008A5_0001 VISTA 10:77875813-78480338
CIL_00084G CIL_00084G_0001 VISTA 10:77912633-78517575
CIL_000809 CIL_000809_0001 VISTA 10:77918028-78521061
CIL_0007IB CIL_0007IB_0001 CGP 10:77969251-78056812
CIL_0007AW CIL_0007AW_0002 CGP 10:78033760-79316528

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169826 Rps24-202 protein_coding Mus_musculus 0 525
ENSMUST00000112384 Rps24-201 protein_coding Mus_musculus 0 523
ENSMUST00000118723 Rps24-ps3-001 processed_pseudogene Mus_musculus 0 501
ENSMUST00000162574 AC122223.2-001 processed_pseudogene Mus_musculus 0 481
ENSMUST00000184151 RP23-85E24.2-001 transcribed_processed_pseudogene Mus_musculus 0 479
ENSMUST00000078768 Gm6030-201 processed_pseudogene Mus_musculus 0 468
ENSMUST00000117908 Gm11878-001 processed_pseudogene Mus_musculus 0 455
ENSMUST00000119883 Gm7363-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000091375 Rps24-ps2-201 processed_pseudogene Mus_musculus 0 407
ENSMUST00000119769 Gm12739-001 processed_pseudogene Mus_musculus 0 361
ENSDART00000100813 rps24-002 protein_coding Danio_rerio 0 298
ENSDART00000143934 rps24-003 retained_intron Danio_rerio 0 294
ENSDART00000147729 rps24-001 protein_coding Danio_rerio 0 294
ENSDART00000141945 rps24-006 protein_coding Danio_rerio 0 287
ENSDART00000133404 rps24-005 protein_coding Danio_rerio 0 287

Loading