C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000485708 RPS24-002 ENSG00000138326 9606 + 10:78033844-78040670 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverMuscleENST00000485708
Transcript ID Brain Colon Heart Liver Muscle
ENST00000485708 50.261±7.14 100.626±0.00 80.339±49.22 46.402±0.00 368.269±283.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A5 CIL_0008A5_0001 VISTA 10:77875813-78480338
CIL_00084G CIL_00084G_0001 VISTA 10:77912633-78517575
CIL_000809 CIL_000809_0001 VISTA 10:77918028-78521061
CIL_0007IB CIL_0007IB_0001 CGP 10:77969251-78056812
CIL_0007AW CIL_0007AW_0002 CGP 10:78033760-79316528

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169826 Rps24-202 protein_coding Mus_musculus 0 510
ENSMUST00000112384 Rps24-201 protein_coding Mus_musculus 0 510
ENSMUST00000118723 Rps24-ps3-001 processed_pseudogene Mus_musculus 0 499
ENSMUST00000162574 AC122223.2-001 processed_pseudogene Mus_musculus 0 481
ENSMUST00000078768 Gm6030-201 processed_pseudogene Mus_musculus 0 466
ENSMUST00000117908 Gm11878-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000140330 Gm2830-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000119883 Gm7363-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000091375 Rps24-ps2-201 processed_pseudogene Mus_musculus 0 405
ENSMUST00000119769 Gm12739-001 processed_pseudogene Mus_musculus 0 361
ENSDART00000100813 rps24-002 protein_coding Danio_rerio 0 300
ENSDART00000143934 rps24-003 retained_intron Danio_rerio 0 294
ENSDART00000147729 rps24-001 protein_coding Danio_rerio 0 294
ENSDART00000141945 rps24-006 protein_coding Danio_rerio 0 287
ENSDART00000133404 rps24-005 protein_coding Danio_rerio 0 287

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