C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007MG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
CELF4 UCNEbase 9606 18:36900350-37243731
GeneTranscriptPositionBiotype
ENSG00000101489 (CELF4)
CUGBP, Elav-like family member 4 		ENST00000334919 (CELF4-002) 37243047-37565641 protein_coding
ENST00000361795 (CELF4-023) 37244968-37565765 protein_coding
ENST00000420428 (CELF4-201) 37243047-37566037 protein_coding
ENST00000586009 (CELF4-016) 37243047-37270920 protein_coding
ENST00000587074 (CELF4-010) 37266533-37273584 processed_transcript
ENST00000587449 (CELF4-012) 37528967-37565608 processed_transcript
ENST00000587657 (CELF4-015) 37259180-37273043 protein_coding
ENST00000587819 (CELF4-008) 37273101-37485857 protein_coding
ENST00000587911 (CELF4-017) 37245004-37264754 protein_coding
ENST00000587924 (CELF4-007) 37274865-37486034 protein_coding
ENST00000588591 (CELF4-013) 37243047-37273043 protein_coding
ENST00000588597 (CELF4-003) 37259044-37565651 protein_coding
ENST00000589229 (CELF4-009) 37273109-37485747 protein_coding
ENST00000589386 (CELF4-011) 37253855-37273043 protein_coding
ENST00000590011 (CELF4-018) 37244834-37253981 processed_transcript
ENST00000590112 (CELF4-005) 37244614-37485576 nonsense_mediated_decay
ENST00000591282 (CELF4-004) 37253811-37565641 protein_coding
ENST00000591287 (CELF4-001) 37243047-37565748 protein_coding
ENST00000591421 (CELF4-006) 37266217-37273158 retained_intron
ENST00000593271 (CELF4-014) 37253838-37273043 protein_coding
ENST00000601019 (CELF4-021) 37244968-37565748 protein_coding
ENST00000601392 (CELF4-020) 37273053-37565748 protein_coding
ENST00000603232 (CELF4-022) 37244980-37565827 protein_coding
ENSG00000150477 (KIAA1328)
KIAA1328 		ENST00000280020 (KIAA1328-001) 36829117-37225324 protein_coding
ENST00000586135 (KIAA1328-006) 36923940-37222302 protein_coding
ENST00000586501 (KIAA1328-007) 37066866-37075648 protein_coding
ENST00000587139 (KIAA1328-008) 36829240-37223678 protein_coding
ENST00000590456 (KIAA1328-010) 36923911-36955852 processed_transcript
ENST00000590617 (KIAA1328-004) 36829131-37222307 nonsense_mediated_decay
ENST00000591619 (KIAA1328-005) 36832674-37229885 protein_coding
ENST00000591911 (KIAA1328-009) 36923905-37067201 protein_coding
ENST00000592521 (KIAA1328-003) 36829129-36886404 protein_coding
ENST00000592611 (KIAA1328-002) 36829106-37231518 nonsense_mediated_decay
ENST00000599493 (KIAA1328-012) 37067340-37084425 retained_intron
ENST00000601437 (KIAA1328-011) 37229579-37232172 processed_transcript
ENSG00000267039 (RP11-58G13.1)
 ENST00000586106 (RP11-58G13.1-001) 36901946-36923814 antisense
ENSG00000267651 (RP11-95O2.1)
 ENST00000589715 (RP11-95O2.1-001) 37234119-37236242 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0007MG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
CELF4 UCNEbase 10090 18:25240836-25478294
GeneTranscriptPositionBiotype
ENSMUSG00000024268 (Celf4)
CUGBP, Elav-like family member 4 		ENSMUST00000025117 (Celf4-201) 25477632-25753983 protein_coding
ENSMUST00000115816 (Celf4-202) 25477632-25753983 protein_coding
ENSMUSG00000033632 (AW554918)
expressed sequence AW554918 		ENSMUST00000036619 (AW554918-003) 25169010-25467316 protein_coding
ENSMUST00000097643 (AW554918-201) 25169020-25467321 protein_coding
ENSMUST00000100131 (AW554918-006) 25233914-25464092 protein_coding
ENSMUST00000159605 (AW554918-004) 25168999-25463725 nonsense_mediated_decay
ENSMUST00000160530 (AW554918-005) 25169023-25463896 nonsense_mediated_decay
ENSMUST00000161262 (AW554918-001) 25169014-25189233 processed_transcript
ENSMUST00000162149 (AW554918-002) 25169020-25290908 processed_transcript
ENSMUST00000165400 (AW554918-202) 25169020-25467321 protein_coding
ENSMUSG00000089908 (Gm16558)
predicted gene 16558 		ENSMUST00000163015 (Gm16558-001) 25391801-25392332 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007MG_0001ENSG00000101489ENST00000334919ENST00000420428ENST00000586009ENST00000587074ENST00000587449ENST00000588591ENST00000590011ENST00000591287ENST00000591421ENST00000601392ENST00000603232ENSG00000150477ENST00000280020ENST00000586501ENSG00000267039ENST00000586106ENSG00000267651ENST00000589715CIL_0007MG_0002ENSMUSG00000024268ENSMUST00000025117ENSMUST00000115816ENSMUSG00000033632ENSMUST00000036619ENSMUST00000097643ENSMUST00000160530ENSMUST00000161262ENSMUST00000165400ENSMUSG00000089908ENSMUST00000163015
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101489 ENST00000334919 N/A N/A N/A 3.187±0.00 N/A 0.163±0.00 N/A N/A N/A N/A N/A N/A 0.119±0.00 N/A
ENST00000361795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420428 0.018±0.00 N/A N/A N/A N/A N/A N/A N/A 0.003±0.00 N/A 0.014±0.00 0.194±0.00 N/A 0.454±0.00
ENST00000586009 N/A N/A N/A N/A 0.064±0.00 0.266±0.00 N/A N/A N/A 0.033±0.00 N/A 0.037±0.03 0.131±0.00 0.978±0.00
ENST00000587074 N/A N/A N/A N/A N/A N/A N/A N/A 1.040±0.00 N/A N/A N/A N/A N/A
ENST00000587449 0.105±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588591 N/A N/A N/A 2.180±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590011 0.148±0.00 N/A N/A N/A N/A N/A 0.054±0.00 N/A N/A 0.283±0.00 N/A N/A N/A N/A
ENST00000590112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591287 N/A N/A N/A 5.103±2.14 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591421 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.221±0.00 N/A N/A N/A N/A
ENST00000593271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601392 N/A N/A N/A N/A N/A 0.891±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603232 N/A N/A N/A 23.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000150477 ENST00000280020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.133±0.00 N/A N/A
ENST00000586135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586501 N/A N/A 27.086±0.00 13.605±0.00 31.581±0.00 15.892±0.00 11.036±0.00 11.843±0.00 16.381±0.00 18.000±0.00 3.635±0.00 14.487±9.82 N/A N/A
ENST00000587139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267039 ENST00000586106 N/A 0.046±0.00 0.373±0.00 0.101±0.00 N/A 0.378±0.00 0.023±0.01 N/A N/A 0.046±0.00 N/A N/A N/A 0.703±0.32
ENSG00000267651 ENST00000589715 0.039±0.00 0.089±0.00 0.077±0.00 0.561±0.42 0.061±0.02 0.036±0.02 0.031±0.01 0.005±0.00 0.072±0.00 0.349±0.00 N/A 0.103±0.07 0.019±0.00 0.062±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024268 ENSMUST00000025117 0.337±0.05 2.943±1.56 0.378±0.00 66.205±17.34 0.542±0.26 1.987±0.64 0.127±0.05 0.127±0.04 0.104±0.09 0.179±0.13 0.034±0.02 0.617±0.41 0.276±0.30 0.631±0.25
ENSMUST00000115816 N/A 1.297±0.36 0.170±0.07 15.494±0.43 0.296±0.04 0.556±0.11 N/A 0.090±0.03 0.061±0.05 0.132±0.05 N/A 0.189±0.07 N/A 0.389±0.18
ENSMUSG00000033632 ENSMUST00000036619 N/A N/A N/A N/A N/A 0.956±0.00 N/A N/A N/A 0.993±0.17 0.349±0.08 1.839±0.32 0.356±0.00 9.589±0.00
ENSMUST00000097643 0.663±0.00 N/A 2.386±0.03 2.217±0.80 N/A N/A 0.679±0.36 N/A 1.060±0.38 N/A 0.691±0.13 2.638±0.73 1.252±0.52 2.715±0.00
ENSMUST00000100131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.607±0.00
ENSMUST00000161262 N/A N/A N/A N/A N/A N/A 1.940±0.07 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165400 N/A N/A N/A N/A 0.677±0.00 N/A N/A 0.812±0.00 N/A 1.084±0.00 N/A N/A 0.454±0.00 N/A
ENSMUSG00000089908 ENSMUST00000163015 N/A N/A 0.052±0.03 0.135±0.06 0.328±0.00 N/A 0.088±0.00 0.115±0.00 0.044±0.01 N/A N/A 0.126±0.05 0.058±0.03 0.088±0.00

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