C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007MR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
UBE2E3 UCNEbase 9606 2:181062934-181378514
GeneTranscriptPositionBiotype
ENSG00000170035 (UBE2E3)
ubiquitin-conjugating enzyme E2E 3 		ENST00000392415 (UBE2E3-201) 180980385-181063424 protein_coding
ENST00000410062 (UBE2E3-001) 180980606-181063441 protein_coding
ENST00000602291 (UBE2E3-012) 180980391-181062849 protein_coding
ENST00000602303 (UBE2E3-007) 180967248-181060812 protein_coding
ENST00000602475 (UBE2E3-005) 180980807-180990046 protein_coding
ENST00000602479 (UBE2E3-004) 180980376-181060810 protein_coding
ENST00000602499 (UBE2E3-006) 180981036-181057816 protein_coding
ENST00000602632 (UBE2E3-008) 180982023-180990005 protein_coding
ENST00000602710 (UBE2E3-002) 180981124-181063441 protein_coding
ENST00000602762 (UBE2E3-010) 180982018-181076232 processed_transcript
ENST00000602837 (UBE2E3-013) 181057691-181076478 processed_transcript
ENST00000602888 (UBE2E3-011) 180984006-181062920 retained_intron
ENST00000602959 (UBE2E3-003) 180980373-181063029 protein_coding
ENST00000602970 (UBE2E3-009) 181062890-181076585 processed_transcript
ENSG00000234663 (AC104820.2)
 ENST00000414750 (AC104820.2-003) 181101932-181192053 lincRNA
ENST00000424170 (AC104820.2-002) 181123835-181339776 lincRNA
ENST00000424655 (AC104820.2-005) 181123942-181342311 lincRNA
ENST00000428474 (AC104820.2-004) 181123896-181362911 lincRNA
ENST00000435411 (AC104820.2-001) 181123837-181399559 lincRNA
CIL_0007MR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
UBE2E3 UCNEbase 10090 2:78920102-79188778
GeneTranscriptPositionBiotype
ENSMUSG00000027011 (Ube2e3)
ubiquitin-conjugating enzyme E2E 3 		ENSMUST00000028398 (Ube2e3-001) 78869047-78921293 protein_coding
ENSMUST00000121433 (Ube2e3-007) 78869678-78920297 protein_coding
ENSMUST00000124120 (Ube2e3-006) 78868124-78870607 protein_coding
ENSMUST00000130914 (Ube2e3-004) 78868238-78913739 protein_coding
ENSMUST00000138864 (Ube2e3-003) 78869334-78872759 retained_intron
ENSMUST00000153266 (Ube2e3-005) 78918393-78920052 retained_intron
ENSMUST00000153614 (Ube2e3-002) 78869240-78914551 retained_intron
CIL_0007MR_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
UBE2E3 UCNEbase 7955 9:44952835-45089681
GeneTranscriptPositionBiotype
ENSDARG00000012244 (ube2e3)
ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) 		ENSDART00000020550 (ube2e3-001) 44870945-44953369 protein_coding
ENSDART00000136628 (ube2e3-002) 44871186-44874507 retained_intron
ENSDART00000138549 (ube2e3-003) 44873919-44952835 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007MR_0001ENSG00000170035ENST00000392415ENST00000410062ENST00000602291ENST00000602303ENST00000602475ENST00000602479ENST00000602499ENST00000602632ENST00000602710ENST00000602762ENST00000602837ENST00000602888ENST00000602959ENST00000602970ENSG00000234663ENST00000414750ENST00000424170ENST00000424655ENST00000428474ENST00000435411CIL_0007MR_0002ENSMUSG00000027011ENSMUST00000028398ENSMUST00000121433ENSMUST00000124120ENSMUST00000130914ENSMUST00000138864ENSMUST00000153266ENSMUST00000153614CIL_0007MR_0003ENSDARG00000012244ENSDART00000020550ENSDART00000136628ENSDART00000138549
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007MR_0001ENSG00000170035ENST00000392415ENST00000410062ENST00000602710ENST00000602888ENST00000602959ENSG00000234663ENST00000414750ENST00000424170ENST00000424655ENST00000428474ENST00000435411CIL_0007MR_0002ENSMUSG00000027011ENSMUST00000028398ENSMUST00000121433CIL_0007MR_0003ENSDARG00000012244ENSDART00000020550ENSDART00000138549
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000170035 ENST00000392415 5.449±0.00 11.454±0.00 1.404±0.00 16.991±0.00 5.812±3.98 8.659±0.00 4.315±0.00 18.749±0.00 2.653±0.00 3.819±0.00 6.181±0.00 16.465±7.30 16.679±0.73 28.001±0.00
ENST00000410062 13.831±0.00 5.926±0.00 N/A 12.933±3.32 9.466±8.01 7.352±4.52 7.078±5.68 7.493±4.85 6.183±3.20 13.853±0.00 15.126±2.12 8.563±3.29 6.824±0.75 19.041±1.69
ENST00000602291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602710 N/A N/A N/A N/A N/A 1.186±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602888 N/A N/A 8.194±0.00 16.343±0.00 5.501±0.00 N/A 2.162±0.00 N/A 2.805±0.00 2.806±0.00 N/A 18.672±12.68 24.604±0.00 59.601±0.00
ENST00000602959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.744±0.00 24.750±0.00 23.914±0.00
ENST00000602970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000234663 ENST00000414750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.065±0.00 N/A
ENST00000424170 N/A N/A 0.641±0.00 N/A N/A 0.171±0.00 N/A N/A N/A N/A N/A 0.028±0.00 N/A N/A
ENST00000424655 0.034±0.00 N/A N/A 0.137±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428474 N/A N/A N/A N/A N/A 0.376±0.00 N/A N/A 1.244±0.00 0.413±0.10 N/A 0.555±0.69 0.083±0.00 0.096±0.07
ENST00000435411 N/A N/A N/A N/A 0.129±0.09 N/A N/A N/A 0.037±0.00 N/A N/A 0.035±0.02 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027011 ENSMUST00000028398 11.453±4.68 66.251±23.85 11.745±0.99 35.539±21.54 21.202±15.04 25.151±2.75 7.433±1.82 17.638±4.70 20.847±10.39 25.695±7.25 4.590±0.71 40.083±18.90 17.554±4.98 5.233±2.09
ENSMUST00000121433 5.365±1.79 N/A 3.433±0.00 19.664±0.00 8.345±5.89 N/A 4.602±0.65 3.378±0.00 N/A N/A 5.199±0.48 16.719±3.07 21.372±4.49 5.178±0.84
ENSMUST00000124120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138864 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000012244 ENSDART00000020550 N/A N/A N/A 55.070±12.99 N/A N/A 76.297±40.79 45.274±18.87 1.756±0.00 N/A 14.841±0.00 N/A N/A N/A
ENSDART00000136628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000138549 N/A N/A N/A 31.713±2.45 N/A N/A 61.468±5.43 10.649±0.00 0.987±0.00 N/A 8.347±0.00 N/A N/A N/A

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