C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pecanex-like 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120589 Pcnxl2-003 ENSMUSG00000060212 10090 - 8:125751509-125839850 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120589
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120589 0.540±0.61 0.153±0.03 0.400±0.29 1.334±0.43 0.082±0.03 0.145±0.04 0.051±0.05 0.023±0.01 0.120±0.00 0.124±0.02 2.783±1.45 0.123±0.07 0.083±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086G CIL_00086G_0002 VISTA 8:125257735-125859984
CIL_0001OO CIL_0001OO_0002 CGP 8:125729963-125898317
CIL_0006KA CIL_0006KA_0002 CGP 8:125751508-125947439

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258229 PCNXL2-002 protein_coding Homo_sapiens 0 3003
ENST00000344698 PCNXL2-001 protein_coding Homo_sapiens 0 2030
ENST00000355703 PCNXL3-001 protein_coding Homo_sapiens 0 411
ENST00000430153 PCNXL2-201 protein_coding Homo_sapiens 0 641
ENST00000439247 PCNXL3-003 retained_intron Homo_sapiens 0 411
ENST00000462233 PCNXL2-007 nonsense_mediated_decay Homo_sapiens 0 1552
ENST00000462762 PCNXL2-016 processed_transcript Homo_sapiens 5e-27 124
ENST00000475463 PCNXL2-005 nonsense_mediated_decay Homo_sapiens 0 641
ENST00000484347 PCNXL2-011 protein_coding Homo_sapiens 0 407
ENST00000486012 PCNXL2-012 nonsense_mediated_decay Homo_sapiens 0 394
ENST00000488780 PCNXL2-010 protein_coding Homo_sapiens 0 641
ENST00000490102 PCNXL2-022 nonsense_mediated_decay Homo_sapiens 0 274
ENST00000496675 PCNXL2-015 processed_transcript Homo_sapiens 2e-27 126
ENST00000520463 PCNXL2-021 processed_transcript Homo_sapiens 0 374

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