C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pecanex-like 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119305 Pcnxl2-004 ENSMUSG00000060212 10090 - 8:125751511-125774128 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119305
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119305 0.285±0.16 0.107±0.01 0.333±0.15 13.391±0.00 0.100±0.02 0.130±0.06 0.104±0.07 0.071±0.03 0.034±0.02 0.378±0.00 0.177±0.08 1.667±0.36 0.212±0.24 2.531±0.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086G CIL_00086G_0002 VISTA 8:125257735-125859984
CIL_0001OO CIL_0001OO_0002 CGP 8:125729963-125898317
CIL_0006KA CIL_0006KA_0002 CGP 8:125751508-125947439

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258229 PCNXL2-002 protein_coding Homo_sapiens 0 1866
ENST00000344698 PCNXL2-001 protein_coding Homo_sapiens 0 1742
ENST00000355703 PCNXL3-001 protein_coding Homo_sapiens 0 302
ENST00000439247 PCNXL3-003 retained_intron Homo_sapiens 0 302
ENST00000462233 PCNXL2-007 nonsense_mediated_decay Homo_sapiens 0 1552
ENST00000462762 PCNXL2-016 processed_transcript Homo_sapiens 5e-27 124
ENST00000496675 PCNXL2-015 processed_transcript Homo_sapiens 2e-27 126

Loading