C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00097S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm40 VISTA 9606 16:65072213-65673956
GeneTranscriptPositionBiotype
ENSG00000140937 (CDH11)
cadherin 11, type 2, OB-cadherin (osteoblast) 		ENST00000268603 (CDH11-001) 64943753-65122198 protein_coding
ENST00000394156 (CDH11-002) 64943753-65122036 protein_coding
ENST00000562325 (CDH11-017) 65004803-65122092 protein_coding
ENST00000562712 (CDH11-010) 65004709-65059678 protein_coding
ENST00000562882 (CDH11-016) 65004766-65072213 protein_coding
ENST00000562998 (CDH11-015) 65004660-65122065 protein_coding
ENST00000563255 (CDH11-008) 65053899-65124188 processed_transcript
ENST00000563492 (CDH11-005) 65053804-65126112 processed_transcript
ENST00000564317 (CDH11-007) 65004673-65122365 protein_coding
ENST00000564770 (CDH11-014) 65094607-65122015 processed_transcript
ENST00000565210 (CDH11-011) 65006862-65122046 processed_transcript
ENST00000566827 (CDH11-004) 64947547-65121930 protein_coding
ENST00000567934 (CDH11-003) 64991913-65072260 protein_coding
ENST00000568340 (CDH11-009) 65004853-65124286 processed_transcript
ENST00000569095 (CDH11-013) 64968434-64972949 processed_transcript
ENST00000569128 (CDH11-012) 64991343-64998629 retained_intron
ENST00000569624 (CDH11-018) 65004642-65124292 processed_transcript
ENST00000569783 (CDH11-006) 65118801-65122057 processed_transcript
ENST00000619158 (CDH11-019) 64984696-64988334 protein_coding
ENSG00000259847 (RP11-95H3.1)
 ENST00000562742 (RP11-95H3.1-002) 65176151-65176713 lincRNA
ENST00000563754 (RP11-95H3.1-001) 65141756-65176573 lincRNA
ENSG00000260004 (RP11-351A20.2)
 ENST00000568659 (RP11-351A20.2-001) 65601101-65601698 lincRNA
ENSG00000261742 (LINC00922)
long intergenic non-protein coding RNA 922 		ENST00000564041 (LINC00922-003) 65285024-65571789 lincRNA
ENST00000568492 (LINC00922-002) 65285024-65571789 lincRNA
ENST00000569736 (LINC00922-001) 65284499-65576300 lincRNA
ENSG00000261818 (RP11-351A20.1)
 ENST00000563811 (RP11-351A20.1-001) 65580668-65646947 lincRNA
CIL_00097S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm40 VISTA 10090 8:102777237-103378991
GeneTranscriptPositionBiotype
ENSMUSG00000031673 (Cdh11)
cadherin 11 		ENSMUST00000075190 (Cdh11-201) 102632995-102785111 protein_coding
ENSMUSG00000063696 (Gm8730)
predicted pseudogene 8730 		ENSMUST00000076373 (Gm8730-201) 102864779-102865853 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00097S_0001ENSG00000140937ENST00000268603ENST00000394156ENST00000562325ENST00000562712ENST00000562882ENST00000562998ENST00000563255ENST00000563492ENST00000564317ENST00000564770ENST00000565210ENST00000566827ENST00000567934ENST00000568340ENST00000569095ENST00000569128ENST00000569624ENST00000569783ENST00000619158ENSG00000259847ENST00000562742ENST00000563754ENSG00000260004ENST00000568659ENSG00000261742ENST00000564041ENST00000568492ENST00000569736ENSG00000261818ENST00000563811CIL_00097S_0002ENSMUSG00000031673ENSMUST00000075190ENSMUSG00000063696ENSMUST00000076373
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00097S_0001ENSG00000140937ENST00000268603ENST00000394156ENST00000565210ENST00000566827ENST00000567934ENST00000569095ENST00000619158ENSG00000259847ENST00000562742ENST00000563754ENSG00000260004ENST00000568659ENSG00000261742ENST00000564041ENST00000568492ENST00000569736ENSG00000261818ENST00000563811CIL_00097S_0002ENSMUSG00000031673ENSMUST00000075190ENSMUSG00000063696ENSMUST00000076373
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140937 ENST00000268603 N/A 2.590±0.00 0.683±0.00 1.035±0.14 3.680±1.77 1.632±0.56 0.167±0.00 2.534±0.00 1.871±1.85 3.380±0.31 N/A 6.034±2.21 6.786±6.03 2.795±2.48
ENST00000394156 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.226±0.00 N/A N/A N/A 0.256±0.00
ENST00000562325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563255 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565210 N/A N/A N/A N/A N/A N/A N/A N/A 0.171±0.00 N/A N/A N/A N/A N/A
ENST00000566827 5.800±0.00 8.538±0.00 0.818±0.00 3.594±1.33 4.318±1.64 2.741±1.33 1.939±0.00 4.799±0.00 N/A 6.993±3.85 0.510±0.30 33.197±31.81 38.602±0.00 6.240±4.66
ENST00000567934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.410±0.00 N/A N/A N/A
ENST00000568340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569095 N/A N/A N/A N/A N/A N/A N/A N/A 0.201±0.00 N/A N/A N/A N/A N/A
ENST00000569128 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619158 N/A N/A N/A 0.649±0.00 N/A N/A N/A N/A N/A 1.932±0.00 N/A 2.717±0.00 N/A 0.275±0.00
ENSG00000259847 ENST00000562742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.516±0.00 N/A N/A
ENST00000563754 0.036±0.00 N/A N/A N/A 0.056±0.00 0.637±0.00 N/A N/A N/A 0.402±0.12 N/A 0.872±0.62 0.086±0.01 N/A
ENSG00000260004 ENST00000568659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.251±0.23
ENSG00000261742 ENST00000564041 N/A N/A N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A N/A N/A N/A N/A
ENST00000568492 N/A N/A N/A N/A 0.242±0.00 N/A N/A N/A N/A 0.709±0.00 N/A N/A 0.033±0.00 N/A
ENST00000569736 N/A N/A N/A N/A N/A 0.037±0.00 N/A N/A N/A N/A N/A 0.018±0.00 0.029±0.00 N/A
ENSG00000261818 ENST00000563811 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.205±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031673 ENSMUST00000075190 33.069±30.08 6.069±1.29 8.305±0.12 10.821±2.69 11.748±3.42 6.748±0.78 2.413±0.24 6.640±0.56 0.316±0.25 28.433±1.21 0.220±0.04 21.073±5.95 3.420±1.95 0.783±0.23
ENSMUSG00000063696 ENSMUST00000076373 87.556±41.16 73.258±1.25 1.463±0.67 5.477±4.06 102.693±50.74 107.357±92.71 18.619±13.08 64.591±3.09 23.451±22.43 34.013±29.86 0.129±0.10 143.281±65.44 2.623±4.78 54.413±27.30

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