C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cadherin 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075190 Cdh11-201 ENSMUSG00000031673 10090 - 8:102632995-102785111 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075190
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075190 33.069±30.08 6.069±1.29 8.305±0.12 10.821±2.69 11.748±3.42 6.748±0.78 2.413±0.24 6.640±0.56 0.316±0.25 28.433±1.21 0.220±0.04 21.073±5.95 3.420±1.95 0.783±0.23

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016021 IEA integral component of membrane
GO:0021957 IGI corticospinal tract morphogenesis
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000002279 cdh11-201 protein_coding Danio_rerio 0 453
ENSDART00000127332 cdh11-001 protein_coding Danio_rerio 0 424
ENST00000268603 CDH11-001 protein_coding Homo_sapiens 0 5024
ENST00000299345 CDH8-013 protein_coding Homo_sapiens 0 320
ENST00000394156 CDH11-002 protein_coding Homo_sapiens 0 2839
ENST00000562325 CDH11-017 protein_coding Homo_sapiens 0 534
ENST00000562712 CDH11-010 protein_coding Homo_sapiens 0 374
ENST00000562882 CDH11-016 protein_coding Homo_sapiens 0 294
ENST00000562998 CDH11-015 protein_coding Homo_sapiens 0 350
ENST00000564317 CDH11-007 protein_coding Homo_sapiens 0 422
ENST00000564770 CDH11-014 processed_transcript Homo_sapiens 3e-35 152
ENST00000565210 CDH11-011 processed_transcript Homo_sapiens 0 294
ENST00000566827 CDH11-004 protein_coding Homo_sapiens 0 2892
ENST00000567934 CDH11-003 protein_coding Homo_sapiens 0 1061
ENST00000569095 CDH11-013 processed_transcript Homo_sapiens 0 385
ENST00000569128 CDH11-012 retained_intron Homo_sapiens 0 483
ENST00000569624 CDH11-018 processed_transcript Homo_sapiens 0 468
ENST00000569783 CDH11-006 processed_transcript Homo_sapiens 0 241
ENST00000577390 CDH8-001 protein_coding Homo_sapiens 0 320
ENST00000577730 CDH8-012 protein_coding Homo_sapiens 0 320
ENST00000583382 CDH8-011 protein_coding Homo_sapiens 0 316
ENST00000584337 CDH8-003 protein_coding Homo_sapiens 0 320
ENST00000585315 CDH8-014 nonsense_mediated_decay Homo_sapiens 0 320
ENST00000619158 CDH11-019 protein_coding Homo_sapiens 0 230

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