C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000006867 ddx3-001 ENSDARG00000020573 7955 + 9:34367809-34388046 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000006867
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000006867 29.634±5.77 25.150±19.03 20.214±5.05 12.128±0.00 8.566±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LW CIL_0007LW_0004 UCNEbase 9:34353947-34387450
CIL_0001X4 CIL_0001X4_0001 CGP 9:34367809-34394507

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0008026 IEA ATP-dependent helicase activity
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000804 Ddx3x-001 protein_coding Mus_musculus 0 339
ENST00000336079 DDX3Y-003 protein_coding Homo_sapiens 0 228
ENST00000399959 DDX3X-001 protein_coding Homo_sapiens 0 353
ENST00000457138 DDX3X-201 protein_coding Homo_sapiens 0 353
ENST00000517322 RP11-613H2.2-001 processed_pseudogene Homo_sapiens 0 274

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