C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: plexin A4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000016230 plxna4-001 ENSDARG00000019328 7955 - 4:14283321-14485844 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000016230
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000016230 8.328±4.60 0.400±0.13 1.132±0.43 0.371±0.00 0.745±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024M CIL_00024M_0001 CGP 4:14283321-14668941

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction
GO:0007275 IEA multicellular organismal development
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004326 Plxna3-001 protein_coding Mus_musculus 0 597
ENSMUST00000115096 Plxna4-001 protein_coding Mus_musculus 5e-31 143
ENSMUST00000154062 Plxna3-002 retained_intron Mus_musculus 0 597
ENST00000321063 PLXNA4-201 protein_coding Homo_sapiens 0 1611
ENST00000359827 PLXNA4-001 protein_coding Homo_sapiens 0 1611
ENST00000393409 PLXNA1-001 protein_coding Homo_sapiens 0 1026
ENST00000496550 PLXNA4-005 retained_intron Homo_sapiens 0 403
ENST00000503234 PLXNA1-002 retained_intron Homo_sapiens 0 758

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